| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5585 |
|---|
| Symbol | |
|---|
| ID | 8336945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6437531 |
|---|
| End bp | 6438430 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644958689 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003116285 |
|---|
| Protein GI | 256394721 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3591] V8-like Glu-specific endopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.482525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.46158 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTTC GTCGCCACGG TCTGATCGCG TCCACGGTTC TCGCTCTGTC GGTGATGGCG
ACGGCCTGCG ACGGCGGCGG TTCCAACGCC CGAACCCCGG CTGAGAGCGC CTCCAGCAGC
GAGGCGGCGG CGGCGAAGGT CGTCACGCAT GTGCTGGAAC CCAAGCCGGA CGACCCGCAC
TCGCTGCTGC ACCCCGGGCC GCCGCTGACC GGCGCGATCC CGGCCGGTAC CACGGTGAAC
GGCAAAGTCA GCGCGCAGAC CTTCGACGGC GTGCCGAAGG TCGGCGCGGT GTTCTTCGGC
GTCGGCGGCG TGGTCTCGGC GCACTACTGC ACCGGCAGCG TCGTGCAGAG CGGGTCCGGC
GACCTGATCG TGACCGCGGG GCACTGCGTG TACAACAAGC TGTTCGGCGG GTGGAACAAC
CACATCGTGT TCGTCCCCGG CTACCACGAC GACACCGCGC CGTACGGCGT GTGGGTGGCG
ACCACGGCGT ATCTGGACTC GACGTGGGTC GCCAGCCAGA ACCCGGACGT CGACATAGCG
TTCCTGAAGG TGCGCGAGGT CGGCGGCGGA ACCAAGACCC TGGAGAGCGC CACCGGAGCG
GACACCTTCT CCGAGGCACC GGGGTACACC AACGCGATCA GCATCGCCTC CTACCCGCTG
ACGGCGAAGA AGCCCGTCGG CTGCACGGCG ACCACGAAGA AGTACTCTGA CACGCAGCTG
GAGCTGGACT GCGCCGGCCT GCCCGACGGA GCGAGCGGAA GCCCGTTCAT CGCCTCCGGA
GACCGCCTGG TCGGCGTGCT CGGCGGATAC GAGCAGGGCG GCAACTCGCC GACCACGTCG
TACAGCATCT ACTTCTCGGA GCGGATCGCG AAGATCTACA AGGCGACCTC AGGGTCCTGA
|
|---|
| Protein sequence | MKFRRHGLIA STVLALSVMA TACDGGGSNA RTPAESASSS EAAAAKVVTH VLEPKPDDPH
SLLHPGPPLT GAIPAGTTVN GKVSAQTFDG VPKVGAVFFG VGGVVSAHYC TGSVVQSGSG
DLIVTAGHCV YNKLFGGWNN HIVFVPGYHD DTAPYGVWVA TTAYLDSTWV ASQNPDVDIA
FLKVREVGGG TKTLESATGA DTFSEAPGYT NAISIASYPL TAKKPVGCTA TTKKYSDTQL
ELDCAGLPDG ASGSPFIASG DRLVGVLGGY EQGGNSPTTS YSIYFSERIA KIYKATSGS
|
|---|
| |