| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5575 |
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| Symbol | |
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| ID | 8336935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6424361 |
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| End bp | 6425806 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644958679 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003116275 |
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| Protein GI | 256394711 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.530519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCAAG ACACCGACCT GGAGCAGGAA GCCACCGGCG TGGAACACAC AGAGGCCGGC
GGCCGCTGGA CCGCCCTGAC CCTGCTGTGC CTGGCGCAGT TCATGCTGAT CGTCGACATC
ACGGCGGTGA ACCTGGCGCT GCCGTCGATG GCCCAGGACC TGGACCTCGG CCGCCAATCG
CTGACCTGGG TGCCGGCGGC GTACACGCTG TGCTTCGGCG GCCTGCTGCT GCTCGGCGGA
CGGCTCGCCG ACGGACTGGG ACGCCGCCGC GCCTTCCTGA TCGGCCTGGC CGCCTTCACC
GGCGCCTCGC TGCTGTCCGG AGCCGCGCAC ACCGGCAGCG AGCTGATCGC CGGGCGCGCC
GCGCAGGGGG TGGCCGCCGC GCTGCTGTCC CCGGCCGCGC TGTCGATCGT CACCACGACC
TTCCACGGCC CGGAGCGGAC CAAGGCGCTC GGCGTCTGGG GCGCGATCGG CGGGGCGGGC
GCGGCGGTCG GCGTGCTGGT CGGCGGGGCG CTGACCTCGG GACCGGGCTG GCGCTGGGTG
TTCTTCGTGA ACCTGCCGGT CGGTCTGGCG GTGCTCGCGC TGCTGCCCCG CCTGGTCCCG
GCGTCGGCTC CGGCGCGGTC GCTGCGCGGT GTGGACGTGC CCGGCGCGCT GACCGCCACG
GCGACCGCCG CCCTGCTCGT CTACGGTCTG ATTCACGCGG GCAGCTCCGG CTGGGGCACC
GCGGCGACGA TGCTGCCGCT GGCCGGCGCG GTGCTGGCAG CAGGAGCGCT GGTCTTGGTG
GAACGCTCGG CGCCGCAACC GCTGCTGCGC CCGGGATTGG TGCGCAACCG CGCGGTGGTC
GCCGGGACCG CGGTGATGTT CGCGGCGACG ATCCTGTTGC TCACCGGGTT CTTTCTCGTC
TCGTGGTACC TCCAGCACCG CGCGGGTTAC TCGGCGCTCA AGACCGGCGT CGTCTACCTG
CCGGTGGCGG TCGCGACAGG TCTCGGCGCG CATCTGGCCT CGCGCAGCCT CGGGCATCTC
GGCTTCCGCC CGACCGCCGT CTCCGGCTTC GTCGTCGCCG CCGTCGGCGC GCTGCTGCTG
ACCCGGCTTC CGGCGAGCGG CAACGCCGCG CTCGCGGTGC TGCCCGGGTT CTTGCTGCTC
AGCGCCGGTG TGGGCATGGC GCTGGTGACG GCCACGACCG TGGCGCTGCA CGAGGCCGAC
CACACCGAGG CCGGGCTGAT CTCGGGCCTG GTCAACACCG GGCACGAACT CGGCTCGGCG
CTCGGCGTGG CGCTGGCCTC GGTCCTGGCC GCCGGGAGCC TCGGGGTGAC GGCGACCGGC
GTCGGCGGAT TCCGTACGGC GTTCGCGGTC GCGGCCGGCA TCGCGGCGGT GGCGGGCGTC
ACGGCGCTGG GCCTGCTGCC CGCCGGACGT CCGGACCCGA CGGCACGGCC GGCCTTCGCT
CACTGA
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| Protein sequence | MEQDTDLEQE ATGVEHTEAG GRWTALTLLC LAQFMLIVDI TAVNLALPSM AQDLDLGRQS
LTWVPAAYTL CFGGLLLLGG RLADGLGRRR AFLIGLAAFT GASLLSGAAH TGSELIAGRA
AQGVAAALLS PAALSIVTTT FHGPERTKAL GVWGAIGGAG AAVGVLVGGA LTSGPGWRWV
FFVNLPVGLA VLALLPRLVP ASAPARSLRG VDVPGALTAT ATAALLVYGL IHAGSSGWGT
AATMLPLAGA VLAAGALVLV ERSAPQPLLR PGLVRNRAVV AGTAVMFAAT ILLLTGFFLV
SWYLQHRAGY SALKTGVVYL PVAVATGLGA HLASRSLGHL GFRPTAVSGF VVAAVGALLL
TRLPASGNAA LAVLPGFLLL SAGVGMALVT ATTVALHEAD HTEAGLISGL VNTGHELGSA
LGVALASVLA AGSLGVTATG VGGFRTAFAV AAGIAAVAGV TALGLLPAGR PDPTARPAFA
H
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