| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5525 |
|---|
| Symbol | |
|---|
| ID | 8336885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 6379249 |
|---|
| End bp | 6380442 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644958629 |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_003116225 |
|---|
| Protein GI | 256394661 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCCG GACCCCAGTT CCGCCTGACC CCGGCCCAGT CAGCTTTCTG CGCCCAGGTC
CGCGCCCTCG CCGAGACCGA CCTCGCCCCG CTGGCCGCCG CCGGCGCCCC CGGGCACGTC
AACCGCCCCC TGCTGGCCGC CATGGGCCGG CACGGGCTGC TGGCGCGCCT GTTCCCCGGC
GGCGCGGACG GCCGCGCCGA GGCCGCCGCC TTGGACCTGT GCCTGCTGCG GGAGTCGCTC
GCGCAGGTGT CGACCGAAGC CGAGACCGCC CTGGCTCTGC AGGGACTCGG CACATATCCG
GTGGTGCAGA GCGGGACGCA GGAACAGATC GCGCACTGGC TGCCGAAGGT GGTGGCCGGC
GAGGCGGTCG CGGCGTTCGC GCTGTCGGAG CCGGGGAGCG GGTCGGACGC GGCGTCGCTG
TCGCTGGCGG CGACGCCGGC GGGCTCGGGT TCCGGATCTG GCGCCGCTCC CGGCTCCGGC
TCCGAATCCA GCGAGGGCTG GACGCTGAAC GGCGAGAAGA TCTGGATCTC CAACGCCCCC
GAAGCCGACT TCTACAGCGT CTTCGCCCGC ACGACCCCCG ACGCGGGAGC CCGAGGCGTC
ACGGCCTTCC TGGTCCCGGC CGACCGCCCC GGCGTCGGCG GCGAGCACCT GGACATGATC
TCCCCGCACC CCATCGGCCG CGTCACCTTC GACAACGTCC CGGTCACCCG CGCCGACCTG
CTCGGCGACG TCGACCAGGG CTTCCGCGTC GCCATGCGCA CCCTGGACCT GTTCCGCCCC
AGCGTCGGCG CCTTCGCCGT CGGCATGGCC CAGGCCGCGC TCGACGCCTC CATCACCCAC
GCCGGCCGGC GCGAAGCCTT CGGCGGCGTC CTGAAAGACC TCCAGGCGGT CTCCCACAAC
CTGGCCGAAA TGGCCACCCG CACCGAAGCC GCCCGCCTCC TCGTCTACAG CGCCGCCGAG
GCCTACGACA GCGGCGAGAA GCGCATCGCC GGCCGCTCAG CGATGGCCAA GCTCTTCGCC
ACCGAGACCG CGCAGTTCGT CATCGACGCC GCCGTCCAGA TCCACGGCGC CCTCGCCCTC
CAACAAGGCC ACCTGCTCGA GCACCTCTAC CGCGAGGTAC GCGCGCCGCG GATCTACGAA
GGCGCCTCCG AGGTGCAGCG GACGATCATC GGGCGCGAGC TGTATCGGAG CTAG
|
|---|
| Protein sequence | MESGPQFRLT PAQSAFCAQV RALAETDLAP LAAAGAPGHV NRPLLAAMGR HGLLARLFPG
GADGRAEAAA LDLCLLRESL AQVSTEAETA LALQGLGTYP VVQSGTQEQI AHWLPKVVAG
EAVAAFALSE PGSGSDAASL SLAATPAGSG SGSGAAPGSG SESSEGWTLN GEKIWISNAP
EADFYSVFAR TTPDAGARGV TAFLVPADRP GVGGEHLDMI SPHPIGRVTF DNVPVTRADL
LGDVDQGFRV AMRTLDLFRP SVGAFAVGMA QAALDASITH AGRREAFGGV LKDLQAVSHN
LAEMATRTEA ARLLVYSAAE AYDSGEKRIA GRSAMAKLFA TETAQFVIDA AVQIHGALAL
QQGHLLEHLY REVRAPRIYE GASEVQRTII GRELYRS
|
|---|
| |