Gene Caci_5516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5516 
Symbol 
ID8336876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6369365 
End bp6369907 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content69% 
IMG OID644958620 
ProductPhosphate acetyltransferase 
Protein accessionYP_003116216 
Protein GI256394652 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1859] RNA:NAD 2'-phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.16983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCT TGTCGAAGCG GATGTCGAGC TGGCTGCGCC ACCACCCCGA GGCGATCGGC 
CTGGAGATGG ACGGCGCGGG GTGGGTGCGG GTGGACGAGC TGCTCGCCAA GGCGGCGGCG
CGCGGGCAGG CTTTCAGCCG GGCCCAGTTG GAAGAAGTCG TCGCCGAGAA CACCAAGAAG
CGCTTCGAAT TCGACGAGAC CGAGACGCTC ATCCGGGCCC GTCAGGGTCA TTCGATACCG
GTCGAACTCG GCTATGCGAC GGCTGAGCCG CCGGAGGTGC TGTTCCACGG GACGGCGCAG
AACACGCTCA CACTGATCTG GCGCGACGGG CTGCTCCCGA TGAAACGCCA TGCGGTGCAC
CTCTCGCCGG ACAAGGAGAC GGCCGTGAAG GTCGGATCCC GGCACGGCAA GCCGGCGGTC
TTGGCCGTCG CCGCCGCGCG CATGCACGCC GAGGGCTACA CGTTCTTCGT GACGGGGAAC
GGTGTGTGGC TGACCGACGC CGTGCCGGCG GAGTACCTGC GCGAGGTTCC GGCGCTCGGC
TGA
 
Protein sequence
MIRLSKRMSS WLRHHPEAIG LEMDGAGWVR VDELLAKAAA RGQAFSRAQL EEVVAENTKK 
RFEFDETETL IRARQGHSIP VELGYATAEP PEVLFHGTAQ NTLTLIWRDG LLPMKRHAVH
LSPDKETAVK VGSRHGKPAV LAVAAARMHA EGYTFFVTGN GVWLTDAVPA EYLREVPALG