Gene Caci_5506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5506 
Symbol 
ID8336866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6352696 
End bp6353973 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content64% 
IMG OID644958610 
Productmetallophosphoesterase 
Protein accessionYP_003116206 
Protein GI256394642 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.562012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000451519 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCTGAACC GCTTGGGGGT CCCACCGTTG AAGCTGCTCC ACGCCGCAGA CCTGCATATA 
GACAGCCCGT TGCACGGCCT GGAGAAGTAT CCGGACGCGC CAGTTGACAT GATCCGCGCG
GCCTCGCGCC GGGCGACAGA GAACCTGGTC GCACTTGCCC TGGACGAGCA AGTGGACGCG
GTGCTGCTCG CGGGCGACGT GTACGACGGC GACTGGCGCG GCTATGACAC GGGATTGTTC
TTTCAACGCC AGCTAGGAAT ACTTGGGGAT GCAGGGATCC AGGTCTATTT GGTCTCCGGA
AACCACGACG CTCAAAGCCA AATCACCAAG AACCTTCGCC TCCCGAATAA CGTACATAAG
TTCGATACCC ACCAGAGCCA GAGCATTGAA GACCCCGATG TGGGGCTGGT GGTACACGGG
CAGGGCTACG CGCGCCGTGA CGTGATGGAG AACCTGGCCG CCGACTATCC CCGGGCAATG
CCCGGCATGT TCAACGTGGG TCTACTGCAC ACTGCTCTCA CTGGCCGGGC CGGCCACACC
AAATACGCGC CATGCAGTGT CGAGGAACTC GTGTCTCGCG GCTATGGGTA CTGGGCCCTC
GGGCACGTCC ACACTCGCGA GGTGGTCTTC GAGGAGCCGC ATATCGTCTT CCCCGGCAAC
ATCCAGGGAC GCAGTATCCG CGAGACCGGC CCCAAGGGCT GCACCCTAGT CACCGTGACC
GACAAGGGCT CGGTGGCCGT GGAACACCGT GACCTCGACG TGGTGCGGTG GGCTCATCTC
CGTGTCGACG CGACGTCCGC CGATGACCTC GACGATGTGT GCGAGCTCGT CCGCACACAA
CTCGCCACGG AACGCGATCG GAGTGACGGT CGGCTGGTGG CGGCACGGGT GACGGTGACG
GGCCGTTCGG CTGCACACGC CGAGCTGTGG CGGGAGCGCG AGCGTCTGAC GGTCGAGGTC
CGCTCCATTG CGGTGGACCT CGGCGAGGTA TGGGTTGAGA AGGTGGGCCC TGGAACGAGC
CCGCTGGATG CGGGGGCCGG TGATGGTGTA AATGACGTCA CCGACATGAT CGCAGGGCTG
CTGCGCACCG CGAAGGAGCT CGGCACCGAC GAGGACGCGG TACGCAGGTT CGTCGAGAGA
GACCCTCTGT GGAGCAAACT CAGCGGTGAT GTGCGCGGCG AGGACAGGCT AAACAGCAGT
AGCGCCGAAT GGTGCGCACA GCTGCTCAGC GAAGCCTCGG ATCTGCTGGT CTCGATGCTG
CAGGAGGGCT CGCGATGA
 
Protein sequence
MLNRLGVPPL KLLHAADLHI DSPLHGLEKY PDAPVDMIRA ASRRATENLV ALALDEQVDA 
VLLAGDVYDG DWRGYDTGLF FQRQLGILGD AGIQVYLVSG NHDAQSQITK NLRLPNNVHK
FDTHQSQSIE DPDVGLVVHG QGYARRDVME NLAADYPRAM PGMFNVGLLH TALTGRAGHT
KYAPCSVEEL VSRGYGYWAL GHVHTREVVF EEPHIVFPGN IQGRSIRETG PKGCTLVTVT
DKGSVAVEHR DLDVVRWAHL RVDATSADDL DDVCELVRTQ LATERDRSDG RLVAARVTVT
GRSAAHAELW RERERLTVEV RSIAVDLGEV WVEKVGPGTS PLDAGAGDGV NDVTDMIAGL
LRTAKELGTD EDAVRRFVER DPLWSKLSGD VRGEDRLNSS SAEWCAQLLS EASDLLVSML
QEGSR