Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5506 |
Symbol | |
ID | 8336866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6352696 |
End bp | 6353973 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644958610 |
Product | metallophosphoesterase |
Protein accession | YP_003116206 |
Protein GI | 256394642 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.562012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0000451519 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCTGAACC GCTTGGGGGT CCCACCGTTG AAGCTGCTCC ACGCCGCAGA CCTGCATATA GACAGCCCGT TGCACGGCCT GGAGAAGTAT CCGGACGCGC CAGTTGACAT GATCCGCGCG GCCTCGCGCC GGGCGACAGA GAACCTGGTC GCACTTGCCC TGGACGAGCA AGTGGACGCG GTGCTGCTCG CGGGCGACGT GTACGACGGC GACTGGCGCG GCTATGACAC GGGATTGTTC TTTCAACGCC AGCTAGGAAT ACTTGGGGAT GCAGGGATCC AGGTCTATTT GGTCTCCGGA AACCACGACG CTCAAAGCCA AATCACCAAG AACCTTCGCC TCCCGAATAA CGTACATAAG TTCGATACCC ACCAGAGCCA GAGCATTGAA GACCCCGATG TGGGGCTGGT GGTACACGGG CAGGGCTACG CGCGCCGTGA CGTGATGGAG AACCTGGCCG CCGACTATCC CCGGGCAATG CCCGGCATGT TCAACGTGGG TCTACTGCAC ACTGCTCTCA CTGGCCGGGC CGGCCACACC AAATACGCGC CATGCAGTGT CGAGGAACTC GTGTCTCGCG GCTATGGGTA CTGGGCCCTC GGGCACGTCC ACACTCGCGA GGTGGTCTTC GAGGAGCCGC ATATCGTCTT CCCCGGCAAC ATCCAGGGAC GCAGTATCCG CGAGACCGGC CCCAAGGGCT GCACCCTAGT CACCGTGACC GACAAGGGCT CGGTGGCCGT GGAACACCGT GACCTCGACG TGGTGCGGTG GGCTCATCTC CGTGTCGACG CGACGTCCGC CGATGACCTC GACGATGTGT GCGAGCTCGT CCGCACACAA CTCGCCACGG AACGCGATCG GAGTGACGGT CGGCTGGTGG CGGCACGGGT GACGGTGACG GGCCGTTCGG CTGCACACGC CGAGCTGTGG CGGGAGCGCG AGCGTCTGAC GGTCGAGGTC CGCTCCATTG CGGTGGACCT CGGCGAGGTA TGGGTTGAGA AGGTGGGCCC TGGAACGAGC CCGCTGGATG CGGGGGCCGG TGATGGTGTA AATGACGTCA CCGACATGAT CGCAGGGCTG CTGCGCACCG CGAAGGAGCT CGGCACCGAC GAGGACGCGG TACGCAGGTT CGTCGAGAGA GACCCTCTGT GGAGCAAACT CAGCGGTGAT GTGCGCGGCG AGGACAGGCT AAACAGCAGT AGCGCCGAAT GGTGCGCACA GCTGCTCAGC GAAGCCTCGG ATCTGCTGGT CTCGATGCTG CAGGAGGGCT CGCGATGA
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Protein sequence | MLNRLGVPPL KLLHAADLHI DSPLHGLEKY PDAPVDMIRA ASRRATENLV ALALDEQVDA VLLAGDVYDG DWRGYDTGLF FQRQLGILGD AGIQVYLVSG NHDAQSQITK NLRLPNNVHK FDTHQSQSIE DPDVGLVVHG QGYARRDVME NLAADYPRAM PGMFNVGLLH TALTGRAGHT KYAPCSVEEL VSRGYGYWAL GHVHTREVVF EEPHIVFPGN IQGRSIRETG PKGCTLVTVT DKGSVAVEHR DLDVVRWAHL RVDATSADDL DDVCELVRTQ LATERDRSDG RLVAARVTVT GRSAAHAELW RERERLTVEV RSIAVDLGEV WVEKVGPGTS PLDAGAGDGV NDVTDMIAGL LRTAKELGTD EDAVRRFVER DPLWSKLSGD VRGEDRLNSS SAEWCAQLLS EASDLLVSML QEGSR
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