Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5503 |
Symbol | |
ID | 8336863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6349938 |
End bp | 6351332 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644958607 |
Product | AAA ATPase |
Protein accession | YP_003116203 |
Protein GI | 256394639 |
COG category | [R] General function prediction only |
COG ID | [COG3950] Predicted ATP-binding protein involved in virulence |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0328038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00036536 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTACCTCA AGCGCGTGAC ACTGAAGAAC ATCCGAGGGT TTCACGGCGA CCGCCGGGTG GACTTGGATC TGACGCGTCC CGACCGCTCC TACGCCGGCT GGACGGTCTT GGCTGGGCGG AATGGATCGG GCAAGACAAC GCTGCTCCGT GCCATCGCTC TCGCGATAGC CGGACCGACT GCCGCGTCAC GTCTGATCCC CGACTTCGAG GACTGGGTCA GCCACAGGAC ATCCGGTGGT ACTGCCACGG TCGAGCTGGT GCCCGATCCG GCCGTCGACT TGTTCGGAAC GCACTCGCTG CCGGACCTTC AGACGTATTA CTCGGAGCAG ACCGATCCGC TTCTCACAGG ACTAGCATGG ATGTGGACAC AGCCGATTGC AGACCGCAGC GGTAAGCAGG TTCGAAGGCG GCAGCTCGCT CTCACGGCCG TCGATCCAGA ATCCAGCGAG AGGAACCAGC TCGGCCCCTG GATCGATCTC CCAGCGGGCT GGTTCTGTGC CGGGTATGGA CCATTCCGCC GGCTGATGGG GGGCGCAGCC GACGTTCAGC GCCTCATGCA AAGTGATGAC AAGGTCGCTC GACTCGCGGG TCTGTTCTTC GAAGATGCAT CCCTTGCTGA AGGCGTCAGC TGGCTGATTG ACCAACATCT GCGCACCTTG GAGAAGCGAG AGGGCGCGCT GGAGCTGCGG ACTGCGGCTC TGGCGATCCT CGGTGACGGC CTTCTGCCGG ACGACTACCA GATTATGGAC GTCGACTCCG ACGGGCTGTG GATCGAGCAC GGGGGAAGCC GTTTTCCCCT GCGCGAGATG AGCGACGGCT ATCGATCGGT GGCCGCGCTC GTCGTGGACA TCCTCAAGCA ACTGTGGGCC GTCTACGGGG AAATCATCAT CGATGACTCC GGCGGCAAGC CGGTTATCCG GCAACCGGGC ATCATCCTCA TCGACGAGGT AGACGCTCAT CTCCACGTGT CGTGGCAGAA GCGAATCGGC GGGTGGCTCA AAACACACTT CCCGGCGATC CAGTTCATCG TCACCACCCA CAGTCCCTAC ATCTGCCAAG CTGCCGACCC AGGCGGATTG ATCCGCCTGC CGGGTCCCGA CGAGCGCCGC GGAGCCGAGA TCGTCGCGCC GGAGCTGTAC GACCGCATCG TCTTCGGGTC CGGCGAGGAC GTAGTGCTAT CCGATCTGTT CGGGTTGGAC ACCCCCTACT CCGAACAGGC TGACGCGGTT AGAGCCGAAC TCGTCGCCCT CGAAAGAGAG GTCGTCACAG GTCGGGCCAG TGCGGAGCAG ATCGAACGCC ACCGCGAACT CACCATCCTG TTGACCAGTT CACCGAGCGC CCGAGTCGAG GAAGTCGCCG CGCGCCTGTA CGAGCGTTCA CAGGCGGATT CGTGA
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Protein sequence | MYLKRVTLKN IRGFHGDRRV DLDLTRPDRS YAGWTVLAGR NGSGKTTLLR AIALAIAGPT AASRLIPDFE DWVSHRTSGG TATVELVPDP AVDLFGTHSL PDLQTYYSEQ TDPLLTGLAW MWTQPIADRS GKQVRRRQLA LTAVDPESSE RNQLGPWIDL PAGWFCAGYG PFRRLMGGAA DVQRLMQSDD KVARLAGLFF EDASLAEGVS WLIDQHLRTL EKREGALELR TAALAILGDG LLPDDYQIMD VDSDGLWIEH GGSRFPLREM SDGYRSVAAL VVDILKQLWA VYGEIIIDDS GGKPVIRQPG IILIDEVDAH LHVSWQKRIG GWLKTHFPAI QFIVTTHSPY ICQAADPGGL IRLPGPDERR GAEIVAPELY DRIVFGSGED VVLSDLFGLD TPYSEQADAV RAELVALERE VVTGRASAEQ IERHRELTIL LTSSPSARVE EVAARLYERS QADS
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