Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5496 |
Symbol | |
ID | 8336856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6336791 |
End bp | 6337219 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644958600 |
Product | hypothetical protein |
Protein accession | YP_003116196 |
Protein GI | 256394632 |
COG category | [S] Function unknown |
COG ID | [COG4933] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0466193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0701766 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGATC GTGTGCTCCT CTTGTCTTTG CGTCCTCGCT TCGCAGAAGC GATTCTCGAG GGCTCCAAAA CGGTGGAGCT TAGGCGACGA CCTATTGCCG CCGGTGCCGG CACAAGAGTT GTTCTGTACT CGTCAGCGCC GACGATGGCG ATCGTTGGCA CGGCACGGCT GCGAACTGTT GACGTCGCTG CTCCTGAGAC GGCGTGGAAG CGGCATCGCG CCCGGTTGGG TCTGACAAAG GAAGAGTTTG ACGGGTACCT CGACGGCGCC GATCAGGCAT ACCTCCTGCA CCTGACCGCC ATCTGCGAAC TCGATGAGCC ACTGCACCTC TATCACTTGC GGGAGAGCGG GGTCTTTCAG CCTCCGCAGA GTTTTCGATA CGTGGCGGCT GACGATCCAC TACCGCTTCG CGAGCTAGCG GCGCAATAA
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Protein sequence | MTDRVLLLSL RPRFAEAILE GSKTVELRRR PIAAGAGTRV VLYSSAPTMA IVGTARLRTV DVAAPETAWK RHRARLGLTK EEFDGYLDGA DQAYLLHLTA ICELDEPLHL YHLRESGVFQ PPQSFRYVAA DDPLPLRELA AQ
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