Gene Caci_5496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5496 
Symbol 
ID8336856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6336791 
End bp6337219 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content61% 
IMG OID644958600 
Producthypothetical protein 
Protein accessionYP_003116196 
Protein GI256394632 
COG category[S] Function unknown 
COG ID[COG4933] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0466193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0701766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGATC GTGTGCTCCT CTTGTCTTTG CGTCCTCGCT TCGCAGAAGC GATTCTCGAG 
GGCTCCAAAA CGGTGGAGCT TAGGCGACGA CCTATTGCCG CCGGTGCCGG CACAAGAGTT
GTTCTGTACT CGTCAGCGCC GACGATGGCG ATCGTTGGCA CGGCACGGCT GCGAACTGTT
GACGTCGCTG CTCCTGAGAC GGCGTGGAAG CGGCATCGCG CCCGGTTGGG TCTGACAAAG
GAAGAGTTTG ACGGGTACCT CGACGGCGCC GATCAGGCAT ACCTCCTGCA CCTGACCGCC
ATCTGCGAAC TCGATGAGCC ACTGCACCTC TATCACTTGC GGGAGAGCGG GGTCTTTCAG
CCTCCGCAGA GTTTTCGATA CGTGGCGGCT GACGATCCAC TACCGCTTCG CGAGCTAGCG
GCGCAATAA
 
Protein sequence
MTDRVLLLSL RPRFAEAILE GSKTVELRRR PIAAGAGTRV VLYSSAPTMA IVGTARLRTV 
DVAAPETAWK RHRARLGLTK EEFDGYLDGA DQAYLLHLTA ICELDEPLHL YHLRESGVFQ
PPQSFRYVAA DDPLPLRELA AQ