Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5489 |
Symbol | |
ID | 8336849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6329438 |
End bp | 6330661 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644958593 |
Product | alanine racemase domain protein |
Protein accession | YP_003116189 |
Protein GI | 256394625 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.525884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCCT CCCCGCCCGG ACCCGCAGCG GACCGCCGCC GCCTCGACAC CGCGACCGCC GCCTTCGAGC CGCCGTTCGC CGCCGTCGAC CTCGACGCGT TCCACGCCAA CGCCCAGGAC CTGACCCGGC GCGCCGCGGG CAAGGCGATC CGCGTGGCCA GCAAGTCGGT GCGCTGCCGG GCGCTGCTGG AGGAAGTGCT GAGCCTGCCG GGCTACCAGG GCATCCTGGG CTTCACGCTG CCGGAGGCGC TGTGGCTGGC GGCGGAGGGC TTCGACGACA TCGTCGTGGC CTACCCCTCG GCCGACCGCG CCGCCTACGC CGAGCTGGCC GCCGACGCCA CCGCGCTGGC CGCCGTCACG GTCATGATCG ACAGCACCGA CCACCTGGAC CTGATCGAGA AGGCGGTGGC CGGCACGCCC GGCGGGCAGT CCGCGCCGAT CCGGGTCTGC ATCGACATCG ACGCCGCCTT CCACACCGCC GCCGGCCGGA TCCGCATCGG CGCGCGCCGC TCCCCGCTGC ACACTCCGGC GCAGGTCGCG GCGATGGCCC GGGAGGTGCT GCGGCGCGAG CAGTTCAAGC TGGTCGGGCT GATGGCCTAC GAGTCGCAGA TCGCCGGCGT CGGCGACGCG CCCCCCGGAC GCCCGCTGCG CGGCGCGGCG ATCCGCGCGA TGCAGAGCCG CTCGGCGCGC GAGCTGGCGG CCCGGCGCGG CGCGATCGTC GCGGCGGTCC GCGAGCTGGC GCCGCTGGAG TTCGTCAACG GCGGCGGCAC CGGCAGCATC GAGCGCACCA CCGCCGAGGA GGCGGTCACC GAGATCGCCG CCGGCTCCGG CCTTTACCAG CCCTGGCTGT TCGACTCCTA CCGCTCCTTC CGCGGCCGCC CCGCGGCGCT GTTCGCGCTG CCGGTGGTGC GCCGCCCGGG ACCTGAGACC GCGACCGCGC TCGGCGGCGG CTACCCGGCC TCCGGCGCGG CGGGCAAGGA TCGGCTCCCG CAGCCCTACC TGCCGCCGGG GCTGTCCTAC GACCCGAACG AGGCCGCCGG CGAGGTCCAG ACGCCGCTGC TGGGCAAGGT CGCGGCGAGC CTGCGCGTCG GCGACCGGGT GTGGTTCCGG CACACCAAGG CCGGCGAGCT GTGCGAGCGC TTCGACACGC TGCACCTGAT CTCGGGCGAC GAGGTGATCC GCTCCGTCCC GACGTACCGC GGCGAGGGTA AGACCTTCCT GTGA
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Protein sequence | MPASPPGPAA DRRRLDTATA AFEPPFAAVD LDAFHANAQD LTRRAAGKAI RVASKSVRCR ALLEEVLSLP GYQGILGFTL PEALWLAAEG FDDIVVAYPS ADRAAYAELA ADATALAAVT VMIDSTDHLD LIEKAVAGTP GGQSAPIRVC IDIDAAFHTA AGRIRIGARR SPLHTPAQVA AMAREVLRRE QFKLVGLMAY ESQIAGVGDA PPGRPLRGAA IRAMQSRSAR ELAARRGAIV AAVRELAPLE FVNGGGTGSI ERTTAEEAVT EIAAGSGLYQ PWLFDSYRSF RGRPAALFAL PVVRRPGPET ATALGGGYPA SGAAGKDRLP QPYLPPGLSY DPNEAAGEVQ TPLLGKVAAS LRVGDRVWFR HTKAGELCER FDTLHLISGD EVIRSVPTYR GEGKTFL
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