Gene Caci_5318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5318 
Symbol 
ID8336672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6130855 
End bp6131595 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content68% 
IMG OID644958416 
Productglycosyl transferase family 2 
Protein accessionYP_003116018 
Protein GI256394454 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.583889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAACC CGCGCGTCCT GGTGATCATC CCGACCTACA ACGAGGCGGA GAACCTGCCG 
ACGATCGTCG CGCGCGTCCA CGCCGCGAAC CCGGACGTGC ACGTACTCGT GGCCGACGAC
AACTCCCCGG ACGGCACGGG CAAGCTCGCG GACGAACTCG CCGACTCCGA TGAGCGGGTC
AAGGTTCTGC ACCGGGCCGG CAAGGAGGGA CTGGGCAAGG CCTACCTGGC CGGGTTCGCC
TGGGGGATCG AGCACGAATA CGACGTCATC TGCGAGATGG ACGCCGACGG CTCGCACCGC
CCCGAGGACT TCCCGGCGCT GCTCAAGGCG TTGGTGGAGC AGAACGCGGA TCTGGTCCTG
GGCTCGCGCT ATGTGCGCGG CGGCAAGACG GTCGGCTGGC CCAAGCACCG CGAGATCCTG
TCCAAGGGCG GCAACACCTG GGTCCGGCTG GTCACCGGCA TGAAGCTCGC GGACGCCACC
GGCGGCTACC GGCTCTTCCG TCGCGAGACG CTGGAGCGTA TAGAGCTTTC CACGGTCGCC
AGTGCCGGCT ACACCTTTCA GGTGGACCTG GCATGGCGGA CGGTGCGCGC CGGACTGAAG
GTCGTCGAGG TCCCGATCAC CTTCGTCGAA CGCGAACTCG GGGCGTCGAA GATGAGCACG
AACATCGTCG CCGAAGCGCT GTGGCGGACC ACCGTGTGGG GGATGCAGTA CCGGATGAAG
CGCTTGCTGG GCCGCCGCTG A
 
Protein sequence
MTNPRVLVII PTYNEAENLP TIVARVHAAN PDVHVLVADD NSPDGTGKLA DELADSDERV 
KVLHRAGKEG LGKAYLAGFA WGIEHEYDVI CEMDADGSHR PEDFPALLKA LVEQNADLVL
GSRYVRGGKT VGWPKHREIL SKGGNTWVRL VTGMKLADAT GGYRLFRRET LERIELSTVA
SAGYTFQVDL AWRTVRAGLK VVEVPITFVE RELGASKMST NIVAEALWRT TVWGMQYRMK
RLLGRR