| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5288 |
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| Symbol | |
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| ID | 8336642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6093143 |
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| End bp | 6094093 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644958386 |
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| Product | ribonuclease BN |
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| Protein accession | YP_003115988 |
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| Protein GI | 256394424 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.795849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCG GCGACCGTAT AAGAGATCTG ACACGCCGCA TCGACGCTTT CCAGCAGCGG
CACCCCTGGC TGGCGTTCCC CGCGGCGGTC TGGCGCAAGC TCTCCGACGA CCAGGCCGGC
AACCTCACCG GGCTGCTCAC CTTCTACGCC TTCGTCTCCC TGTTCCCGCT GTTGCTGCTG
CTGGTGACCG TGCTCGGCAT CGCGCTGCGG CACGACCCGG CGCTGCAGGA CTGGGTCCTG
AGATCGGCGC TGGCGGACTT CCCGGTGCTC GGCGACCAGC TGCGGGGCAA CGTCCACGCC
CTCGGCCGCG GCGCGACCGG GCTGGTGATC GGGCTCGTCG GCTCGCTGCT CGGCGCGCGC
GGGCTGGCCA ACGCCGCGCA GAACGTCCTG AACCGCCTGT GGGCCGTGCC CTACAACCGC
CGCCCGGGCT TCCCGTGGTC CTGGCTGCGC AGCTACGCCT TCATCGCCGT CGTCGGCATC
GGCATGGCGG CGACCACCCT GGTGGCCGAC CTCTCCTTCG GCATCGGCAG CGGACCGCTG
TCGATCGCGG TCCGGGTGGC AGCCCTGTCC GGAGCGGTGG TGATCGGAAC CCTGGCCTAC
TGGCTCGCCC TGCGCCTGGC GATCGCCGGC GAGGTGGCCG GGCGGGACCT GTGGACCGGC
GCCGTGATCG GAGCCGTGGG CTGGCAGTTC CTGCAGGGCA TCGGCGGCTA CTACATCACC
CACCAGCTCC GCCACGCCTC GACGCTGTAC GGGACCTTCG GACTGGTGCT CGGACTCATC
GCCTGGCTGT ACCTCCAAGC CCGCGTGACC CTGTACGCCG TCGAGGTCGA CGTGGTCCGC
TCGCACAAGC TGTGGCCGCG CAGCCTGTTC CCGCCGCCGA CCACCGAAGG CGACCGGAAG
GCGTGGGATT CGGCGATGGC GGCGCAGGAC CGGGCGCCTA CGTCGGATTA A
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| Protein sequence | MNLGDRIRDL TRRIDAFQQR HPWLAFPAAV WRKLSDDQAG NLTGLLTFYA FVSLFPLLLL
LVTVLGIALR HDPALQDWVL RSALADFPVL GDQLRGNVHA LGRGATGLVI GLVGSLLGAR
GLANAAQNVL NRLWAVPYNR RPGFPWSWLR SYAFIAVVGI GMAATTLVAD LSFGIGSGPL
SIAVRVAALS GAVVIGTLAY WLALRLAIAG EVAGRDLWTG AVIGAVGWQF LQGIGGYYIT
HQLRHASTLY GTFGLVLGLI AWLYLQARVT LYAVEVDVVR SHKLWPRSLF PPPTTEGDRK
AWDSAMAAQD RAPTSD
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