Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5265 |
Symbol | |
ID | 8336619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6064137 |
End bp | 6065777 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644958363 |
Product | amino acid permease-associated region |
Protein accession | YP_003115965 |
Protein GI | 256394401 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTAC ACGAAGCGGC CGGAGGCGCG GGACAGCCCT CCACCCACCT GCGGCGGGAC ATCGGCCTGA TCGGCCTGCT GTGGGCCTCC GAGGGGTCGA TCATCGGCTC GGGCTGGCTG TACAGCGCGC AGAAGGCGCT GGTCGCGGCC GGTCCGGCGG CGCTGATCAG CTGGGGCATC GCGGCGGTGG CGATCATCGC GCTGGCGTTC GTGCACGCCG AGCTCGGCGG CATGTTCCCG GTCGCCGGCG GGACGGCGCG CTATCCGCAC TACGCCTTCG GCGGCGCGGC CGGCGCCTCG TTCGGGTGGT TCACCTGGCT GCAGGCGGTG ACGGTCCCGC CGATCGAGGT GCAGGCGATG ATCGGCTACG CGCAGCACTA CACCTGGGCC GACAGCTGGC AGCACAAGGA CGGCACGCTC ACCGGCTACG GCGAGCTGGT CGCGATCTTG CTGATGGCGC TGTTCACCGC GGTGAACTTC CTCGGGATCC AGAAGCTGGC GGCCGTGAAC AACGCCGCGA CCTGGTGGAA GGTCGGCGTT CCGCTGCTGA CCATCTTCGT GCTGGCCTTC ACCCACTTCC ACAGCGAGAA CTTCACCGCG GCCTCCGGCG GCGGCTTCAT GCCCTTCGGC GCGCACGGCA TCATGTCGGC GGTGTCGACC TCCGGCATCA TCTTCGCGCT GCTCGGCTTC GAGCAGGCGA TCCAGCTCGC CGGCGAGTCG CGCAACCCCA AGCGCGACAT CCCGCGCGCG ACGATCCTGT CGATCCTGAT CGGCGCCGCG ATCTACATCA TGCTGCAGGT GGTCTTCATC GCCGCGCTGC CGGCCGCGAC GTACGCCGCC GGCTGGGCGC ACCTGGACTA CAAGAACATC AGCGGCCCGT TCGCCGGGCT CGCGACCCTG GTCGGGCTCG GCTGGCTGGC GACCGTCCTG TACATCGACG CGATCATCTC GCCCGGCGGC ACCGGCCTGA TCTACACCAC GTCCACCTCG CGCATCACCT ACGGACTGAG CAAGAACGGC TACGTCCCGG TGCAGTACGA GCACGTCACC AAGCGCGGCG TGCCGTGGCT GGGCATGCTC ACCGCGTTCG TCGTCGGCTG CGTCTGCTTC CTGCCGTTCC CCAGCTGGCA GCAGCTCGTG TCCTTCATCA CCTCCGCCAG TGTGCTGATG TACGCCGGGG CGCCGCTGGC CTTCGGCGTG TTCCGCGAGA AGCTGCCGGA TCTGGAGCGT CCCTACCGGC TGGCCGGCGG GGAGGTGCTG TCGCCGTTCG CGTTCATCGT GGCGAACTTC ATCATCCTGT GGGCCGGCTG GGAGACCGAC TGGCGGCTCG GGATCGCCAT CGTCATCGGC TACGCGGTGC TGGCGCTCTC CCGCGCCTTC CGCCTGAACC CGCGGCATCC CCCGATGGAG TGGCGCTCGG CGCAGTGGCT GCTGCCGTAT CTGCTGGTGA TGGGGATCAT CGTGCGGACC AGCGCGTTCG GGCCGATGAA GGACCCGTGG TTCACGGAGT GGACGTCGCT GATCGCGGTC GCGGTGGTGA GCCTGGTGGT CTACTACTGG GCCAGGGCGG TGGCGCTGCC GGTGGAGCGG ATCCGGGCAC ACGTCGCGGA CGTCGAGATC GTCGACGCGG GTGGGCACTG A
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Protein sequence | MAVHEAAGGA GQPSTHLRRD IGLIGLLWAS EGSIIGSGWL YSAQKALVAA GPAALISWGI AAVAIIALAF VHAELGGMFP VAGGTARYPH YAFGGAAGAS FGWFTWLQAV TVPPIEVQAM IGYAQHYTWA DSWQHKDGTL TGYGELVAIL LMALFTAVNF LGIQKLAAVN NAATWWKVGV PLLTIFVLAF THFHSENFTA ASGGGFMPFG AHGIMSAVST SGIIFALLGF EQAIQLAGES RNPKRDIPRA TILSILIGAA IYIMLQVVFI AALPAATYAA GWAHLDYKNI SGPFAGLATL VGLGWLATVL YIDAIISPGG TGLIYTTSTS RITYGLSKNG YVPVQYEHVT KRGVPWLGML TAFVVGCVCF LPFPSWQQLV SFITSASVLM YAGAPLAFGV FREKLPDLER PYRLAGGEVL SPFAFIVANF IILWAGWETD WRLGIAIVIG YAVLALSRAF RLNPRHPPME WRSAQWLLPY LLVMGIIVRT SAFGPMKDPW FTEWTSLIAV AVVSLVVYYW ARAVALPVER IRAHVADVEI VDAGGH
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