| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5125 |
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| Symbol | |
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| ID | 8336479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5883726 |
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| End bp | 5884580 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644958223 |
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| Product | MIP family channel protein |
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| Protein accession | YP_003115825 |
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| Protein GI | 256394261 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAATC GCTTGGCGGA GCGCGTTCGG GCCAAAGGGC TCGTGGGGGA GATGGCCGCG
GAGTTCGCGG GCACGTTCAT CCTTCTGTTG TTCGGTCTCG GCGTGGTGGC CCAGGTGGCC
GCCGGAGGGA TCGGCAACCA CGACAGCATC GCCTGGGCCT GGGGTTTCGG TGTGATGCTC
GGCGTCTATG TGGCGGCCAA GATCACCGGT GCGCACCTGA ACCCCGCGGT CACCGTCGCG
CTGGCCGCCT TCGGCGGCTT CTCGTGGCGC AAAGTGCTGC CCTACTCCGT GGCGCAGGTC
GCCGGCGCGT TCGTCGCGGC GCTGGTCGTG CGCTGGAACT ACACCGAGGT CATCGCGAAG
TTCGACCCGG GCCACACCCT GAAGAGCCAG GGCATCTTCT CCACGCTGCC CGGCAACGGC
ACGCTGCCGG TGCACATGTG GGGCGGGTTC CGCGACCAGG TCATCGGCAC CGCGATCCTG
CTGTTCCTCA TCCTGGCGAT CACCGACGTG CGCAACACCG CGCCGGGAGC CAACCTGGCG
CCGGTCGTCA TCGGCCTGCT CATCGTGGCC ATCGGCATGG CCTTCGGGAC CGACGCCGGC
TACGCCATCA ACCCGGCGCG CGACTTCGGT CCGCGGCTCG CCGAGTTCTT CACCGGCTAT
CACACAGCGT TCCGGGACCA GTACGGCGAT CTGTACTTCT GGGTGCCCAT CGTCGCCCCG
ATCATCGGCG GCCTGCTCGG CGCCTGGCTC TACAAGGTCC TGGTCGGCAC CTTCCTGTCG
GACGAGGCCG AGCCGGACGA CCCGGCCGCC GTGCCGATCG ACCCGGCGGT CCCCGCCGAG
CAGCCGGCTT CCTGA
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| Protein sequence | MANRLAERVR AKGLVGEMAA EFAGTFILLL FGLGVVAQVA AGGIGNHDSI AWAWGFGVML
GVYVAAKITG AHLNPAVTVA LAAFGGFSWR KVLPYSVAQV AGAFVAALVV RWNYTEVIAK
FDPGHTLKSQ GIFSTLPGNG TLPVHMWGGF RDQVIGTAIL LFLILAITDV RNTAPGANLA
PVVIGLLIVA IGMAFGTDAG YAINPARDFG PRLAEFFTGY HTAFRDQYGD LYFWVPIVAP
IIGGLLGAWL YKVLVGTFLS DEAEPDDPAA VPIDPAVPAE QPAS
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