Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5112 |
Symbol | |
ID | 8336466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5871773 |
End bp | 5872564 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644958210 |
Product | transcriptional regulator, ArsR family |
Protein accession | YP_003115812 |
Protein GI | 256394248 |
COG category | [S] Function unknown |
COG ID | [COG3832] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.340574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTCCT ATTGTGGAGC CATGGACCCC GTGTTCAAAG CCCTCGCCGA TCCGACGCGC CGGGCGTTGC TGGACGAGCT GTTCGCCCGC GACGGCCAGA CGCTGGCGGC CCTGACGGCG CAGCACGACA TGACGAGGAT CGCGGTGGCG AAACACCTGA AGATCCTGGA GGAGGCGGGG CTGGTGGTGG CGCGCCGGCG CGGCCGGGAG AAGCTGCACT TCCTCAACGC GGTCCCGATC CGCCTGGTCC ACGACCGGTG GGTCGGCAAG TACACCGAGC AGTGGGCTGC CGGATTGGTG GGCCTGAAGC GCGAGTTGGA GGAAGAGATG GAACGCGTCT TCGAGATCTA CATCCGGACC ACGCCCGAGC GGCTGTGGGA GGCGATCACC GATCCCGAGA TCCGGACGAA GTACCACTTC GGGCTGGCGG TGGAGTCCGA CTGGAGCCCG GGCTCGGACT ACCGGCAGAG CCACCCCGAC GGCGGCAGGC CGATCATCGA GGGCGTGAAC CTGGTGGTCG AGCCGCCGCA CCGGCTGGTG CAGAGCATGC GGGCGCTGTG GGGACCGGAC GCCGAGGCGG CCGGGACGAC CCGGGTGACC TGGGAGATCG AGCCGGTCGG GGACTCCTGC CGGCTGACGG TCGTGCACGA CCAGCTGCCG GCGGACGTGC CGCCGGAGAT CTACGGCGGG TGGCCGATGG TGTTGTCCGG GCTGAAGACG TGGCTGGAGA CGGGGGAACC GCTCACCACG CCCGGATCGC TGATGTACAC GCCGACGAAC GACGACGCGT AG
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Protein sequence | MVSYCGAMDP VFKALADPTR RALLDELFAR DGQTLAALTA QHDMTRIAVA KHLKILEEAG LVVARRRGRE KLHFLNAVPI RLVHDRWVGK YTEQWAAGLV GLKRELEEEM ERVFEIYIRT TPERLWEAIT DPEIRTKYHF GLAVESDWSP GSDYRQSHPD GGRPIIEGVN LVVEPPHRLV QSMRALWGPD AEAAGTTRVT WEIEPVGDSC RLTVVHDQLP ADVPPEIYGG WPMVLSGLKT WLETGEPLTT PGSLMYTPTN DDA
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