Gene Caci_5112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5112 
Symbol 
ID8336466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5871773 
End bp5872564 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content69% 
IMG OID644958210 
Producttranscriptional regulator, ArsR family 
Protein accessionYP_003115812 
Protein GI256394248 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.340574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCCT ATTGTGGAGC CATGGACCCC GTGTTCAAAG CCCTCGCCGA TCCGACGCGC 
CGGGCGTTGC TGGACGAGCT GTTCGCCCGC GACGGCCAGA CGCTGGCGGC CCTGACGGCG
CAGCACGACA TGACGAGGAT CGCGGTGGCG AAACACCTGA AGATCCTGGA GGAGGCGGGG
CTGGTGGTGG CGCGCCGGCG CGGCCGGGAG AAGCTGCACT TCCTCAACGC GGTCCCGATC
CGCCTGGTCC ACGACCGGTG GGTCGGCAAG TACACCGAGC AGTGGGCTGC CGGATTGGTG
GGCCTGAAGC GCGAGTTGGA GGAAGAGATG GAACGCGTCT TCGAGATCTA CATCCGGACC
ACGCCCGAGC GGCTGTGGGA GGCGATCACC GATCCCGAGA TCCGGACGAA GTACCACTTC
GGGCTGGCGG TGGAGTCCGA CTGGAGCCCG GGCTCGGACT ACCGGCAGAG CCACCCCGAC
GGCGGCAGGC CGATCATCGA GGGCGTGAAC CTGGTGGTCG AGCCGCCGCA CCGGCTGGTG
CAGAGCATGC GGGCGCTGTG GGGACCGGAC GCCGAGGCGG CCGGGACGAC CCGGGTGACC
TGGGAGATCG AGCCGGTCGG GGACTCCTGC CGGCTGACGG TCGTGCACGA CCAGCTGCCG
GCGGACGTGC CGCCGGAGAT CTACGGCGGG TGGCCGATGG TGTTGTCCGG GCTGAAGACG
TGGCTGGAGA CGGGGGAACC GCTCACCACG CCCGGATCGC TGATGTACAC GCCGACGAAC
GACGACGCGT AG
 
Protein sequence
MVSYCGAMDP VFKALADPTR RALLDELFAR DGQTLAALTA QHDMTRIAVA KHLKILEEAG 
LVVARRRGRE KLHFLNAVPI RLVHDRWVGK YTEQWAAGLV GLKRELEEEM ERVFEIYIRT
TPERLWEAIT DPEIRTKYHF GLAVESDWSP GSDYRQSHPD GGRPIIEGVN LVVEPPHRLV
QSMRALWGPD AEAAGTTRVT WEIEPVGDSC RLTVVHDQLP ADVPPEIYGG WPMVLSGLKT
WLETGEPLTT PGSLMYTPTN DDA