Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5107 |
Symbol | |
ID | 8336461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5864558 |
End bp | 5866621 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644958205 |
Product | phospholipase C, phosphocholine-specific |
Protein accession | YP_003115807 |
Protein GI | 256394243 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3511] Phospholipase C |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCCTG TTTCCCGCCG CACCTTCCTC GGCTCCGCCG CCGCCCTCGG CGCGACCCTC GGCCTGGAGA GCCTGCCCGG CTCGATCTCG CAGGCCGCCG CCACCGGCAC CGGGACGATC CGCGACGTCA AGCACGTCGT GGTGCTGATG CAGGAGAACC GCAGCTTCGA CCACTACTTC GGGAGCCTGC AGGGGGTGCG CGGGTTCGCC GACCGCGCGA CGGTCCAGAT CGCGGGCGGC TACTCGGTGT TCAACCAGCC GAACGGCTCC GGGCGGCAGT ACCCGTGGCA GCTGTCCGAC ACCAACACCT GGTGGTTCGG GACCACCAAG GAAGAGCTCG CACAATGCGA CGGCTCGCTG GATCACAGCT GGTCCACCCA GCACGCCGCC TGGAACAGCG GCAAGATGGA CAGCTGGATC TCGGCCAAGG GCTCCAACCG GACCATGGGC TTCCTGAACC GCACCGACAT CCCGTTCCAC TACGCGCTCG CCGACGCCTA CACGGTCTGC GACGCCTACC ACTGCTCGAT CCTGTCGGCG ACCGGCCCGA ACCGCACCTA CCTGTGGTCC GGCATGATCG ACCCGAACGG CACGGCCGGC GGACCGGCGT ACGACGGCGG CTCGGAGTCC AACCTGAGCT GGCAGACCTA CGCCGAAGCG CTGCAGAACG CCGGGGTGTC CTGGCGGGTG TATCAGAACG CGAACGACAA TTACGGCGAC AACGCGCTGG CCTACTTCAA GCAGTTCACC GGCGCCGCCA CGTCCAGCCC GCTCTACCAG CGCGGCATGT CCTCGGTCCC GGCGGCCAAG AACTCCACCC CGGACGACAT CGCCGCGGCG ATCAAGGCCG ACGTGCTCGG CGGCACGCTG CCGCAGGTGT CGTGGGTGGT GGCCAACCAG GCGTTCTCCG AGCACCCCGA CGCCCCGCCG AACGACGGCG CGCACTTCGT GAACCTGGTC GTCCAGGCGC TCGCCGCCGA CCCCGCGACG TTCGACTCCA CCGTGCTGTT CCTCAACTAC GACGAGAACG ACGGCTTCTT CGACCACGTC CCGCCGCCGG TCGCGCCGTC CGGGACCGCT GCCGAGAGCA CCCATGGCGC GCCGGTCGGG CTGGGCTTCC GCGTCCCGAT GGTCGTGGTC TCGCCGTGGA CCCGCGGCGG CTGGGTCGAT TCGCAGGTCT ACGACCACAC CTCGGTGATC CGCTTCCTGG AGACCTGGAC CGCGGCCCTG GGCACCCCGG CGACGTGCCC GAACATCAGC GCCTGGCGCC GCCAGGTCTG CGGCGACCTC ACCGGCGCCT TCGACTTCGG CCACCCGGTC AGCGGTCTGC CGAGCCTGCC GGCGACCAGC ACGGTGATCG GGCAGTCGTT CTGCAACGCG CAGACCAACC CCAGCCCGGC GACCAACGCG CTGCCGGCGC AGGAGAGCGG GACACGTCCG GCGCGGGCGC TGCCGTACCA GCCGAACGCG TGGGTGGACC ACCTGGAGTA CGACGCCAAC GGGCAGATCC TGATCTGGCT CCAGATGGCG AACCAGGGTC CGCAGGCGAG CGCCGCCGCG CACTTCTCGG CGTATGCGAA CGCTTATCGC AGCGGCGGTC CGTGGCAGTA CACGGTCGGC GCGTCCAGCA ACGGGACCGA CGGCAGCGCC AAGGACTTCT TCAACATCGG CACGAACTAC GGCAACGGCC AGTACGACCT GACGGTGGTC GGCCCGAACC GCTTCCTGCG GCGCTTCGCC GGCAACGCCA ACGGCAGCGG CGCGACCGCC GAGGCGAGCA CGTACTACGC GCCGGCGCCG AACACCGGGC AGCAGGCGGT GTGGTTCTCG ATGAAGAACA CCGGGACCAG CACGGTCACG TTCACGATCA CCTCGACCAA CTACCGCACC GACGGTCCGT GGACGTACCA GGTGGCGGCC GGGGCGACGG TCGCCGACTA CTTCAACGCG GTCGCCTACG ACCACGGGTG GTACGACTTC ACCGTCACGG TGAGCTCGGA TGCGGCGTGG AGCCGCCGGG CGACCGGGCA CATCGAGACC GGGGCGGCGA GCGTTACCGG CTGA
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Protein sequence | MAPVSRRTFL GSAAALGATL GLESLPGSIS QAAATGTGTI RDVKHVVVLM QENRSFDHYF GSLQGVRGFA DRATVQIAGG YSVFNQPNGS GRQYPWQLSD TNTWWFGTTK EELAQCDGSL DHSWSTQHAA WNSGKMDSWI SAKGSNRTMG FLNRTDIPFH YALADAYTVC DAYHCSILSA TGPNRTYLWS GMIDPNGTAG GPAYDGGSES NLSWQTYAEA LQNAGVSWRV YQNANDNYGD NALAYFKQFT GAATSSPLYQ RGMSSVPAAK NSTPDDIAAA IKADVLGGTL PQVSWVVANQ AFSEHPDAPP NDGAHFVNLV VQALAADPAT FDSTVLFLNY DENDGFFDHV PPPVAPSGTA AESTHGAPVG LGFRVPMVVV SPWTRGGWVD SQVYDHTSVI RFLETWTAAL GTPATCPNIS AWRRQVCGDL TGAFDFGHPV SGLPSLPATS TVIGQSFCNA QTNPSPATNA LPAQESGTRP ARALPYQPNA WVDHLEYDAN GQILIWLQMA NQGPQASAAA HFSAYANAYR SGGPWQYTVG ASSNGTDGSA KDFFNIGTNY GNGQYDLTVV GPNRFLRRFA GNANGSGATA EASTYYAPAP NTGQQAVWFS MKNTGTSTVT FTITSTNYRT DGPWTYQVAA GATVADYFNA VAYDHGWYDF TVTVSSDAAW SRRATGHIET GAASVTG
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