Gene Caci_5101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5101 
Symbol 
ID8336455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5859196 
End bp5859882 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content66% 
IMG OID644958200 
Producthypothetical protein 
Protein accessionYP_003115802 
Protein GI256394238 
COG category[S] Function unknown 
COG ID[COG3828] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.204756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.111259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCA GTGATGCCGC GGTTCCGCGC CGTGTGGTGG TCGTTCGTGG GGGATGGGAG 
GGGCATGCTC CGGTGGCGAC TACTGAGGTG TTCGTTCCGG GGTTGGTGGC GGCCGGGTTT
GAGGTGGTGG TCGCGGATGA TCTTGATGTG TACTGCGATG CCGAGTTGCT CGCCGGGACT
GATCTGGTTG TTCAGTGCTG GTCGGAGGGG GAGGACGCGG CTGAGTTGAG CAGGAAGCAG
AGTGCCGGGT TGGTGGGTGC TGTGGCTGCC GGGATGGGGT TCGCCGGGTG GCATGGCGGG
GTGCTGGCTG CGTTTCGGGA TCCGGACTAT CTGCGCATGG TGGGTGGGCT GTTCTTGTTT
CATCCGCCGG AGTTTTTGAC CTATCGGGTC CGGATTGCGG CCGAGCATGC GGAGCATCCC
ATCGTTGCCG GGCTGGAAGA TTTCGACGTT CACAGTGAGC AGTACTGGGT GCTCGGCGAT
GGCCGCAACA CGGTGCTCGC GACGACTGTC GTGGAGTCGC GGGACGGGGG TCAGGGCGAG
GGTGCTGTGG CCATGCCCGT GGTCTGGACC AGGCGTTGGG GCGCCGGCAA GGTGTTCGTT
TCCGCGGTGG GGCATCGGGT CGAGGACCTG CGGGCGCCGG CTGTCAGAGT CCTGACGGAG
CGCGGTCTGC TCTGGGCGGC GCGGTAG
 
Protein sequence
MAGSDAAVPR RVVVVRGGWE GHAPVATTEV FVPGLVAAGF EVVVADDLDV YCDAELLAGT 
DLVVQCWSEG EDAAELSRKQ SAGLVGAVAA GMGFAGWHGG VLAAFRDPDY LRMVGGLFLF
HPPEFLTYRV RIAAEHAEHP IVAGLEDFDV HSEQYWVLGD GRNTVLATTV VESRDGGQGE
GAVAMPVVWT RRWGAGKVFV SAVGHRVEDL RAPAVRVLTE RGLLWAAR