Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5101 |
Symbol | |
ID | 8336455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5859196 |
End bp | 5859882 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644958200 |
Product | hypothetical protein |
Protein accession | YP_003115802 |
Protein GI | 256394238 |
COG category | [S] Function unknown |
COG ID | [COG3828] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.204756 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.111259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGGCA GTGATGCCGC GGTTCCGCGC CGTGTGGTGG TCGTTCGTGG GGGATGGGAG GGGCATGCTC CGGTGGCGAC TACTGAGGTG TTCGTTCCGG GGTTGGTGGC GGCCGGGTTT GAGGTGGTGG TCGCGGATGA TCTTGATGTG TACTGCGATG CCGAGTTGCT CGCCGGGACT GATCTGGTTG TTCAGTGCTG GTCGGAGGGG GAGGACGCGG CTGAGTTGAG CAGGAAGCAG AGTGCCGGGT TGGTGGGTGC TGTGGCTGCC GGGATGGGGT TCGCCGGGTG GCATGGCGGG GTGCTGGCTG CGTTTCGGGA TCCGGACTAT CTGCGCATGG TGGGTGGGCT GTTCTTGTTT CATCCGCCGG AGTTTTTGAC CTATCGGGTC CGGATTGCGG CCGAGCATGC GGAGCATCCC ATCGTTGCCG GGCTGGAAGA TTTCGACGTT CACAGTGAGC AGTACTGGGT GCTCGGCGAT GGCCGCAACA CGGTGCTCGC GACGACTGTC GTGGAGTCGC GGGACGGGGG TCAGGGCGAG GGTGCTGTGG CCATGCCCGT GGTCTGGACC AGGCGTTGGG GCGCCGGCAA GGTGTTCGTT TCCGCGGTGG GGCATCGGGT CGAGGACCTG CGGGCGCCGG CTGTCAGAGT CCTGACGGAG CGCGGTCTGC TCTGGGCGGC GCGGTAG
|
Protein sequence | MAGSDAAVPR RVVVVRGGWE GHAPVATTEV FVPGLVAAGF EVVVADDLDV YCDAELLAGT DLVVQCWSEG EDAAELSRKQ SAGLVGAVAA GMGFAGWHGG VLAAFRDPDY LRMVGGLFLF HPPEFLTYRV RIAAEHAEHP IVAGLEDFDV HSEQYWVLGD GRNTVLATTV VESRDGGQGE GAVAMPVVWT RRWGAGKVFV SAVGHRVEDL RAPAVRVLTE RGLLWAAR
|
| |