Gene Caci_5096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5096 
Symbol 
ID8336450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5853470 
End bp5854396 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content69% 
IMG OID644958195 
Productaldo/keto reductase 
Protein accessionYP_003115797 
Protein GI256394233 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00292864 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.179601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCG ATCTTCCCCG GCTGGGCTTC GGCGCGGCCG CGATCGCGAA CGAGGGAGTC 
GGCCTCGGGC AGGCTCTGGA CTGCGTGGAC GCGGCCTGGG ACAGCGGGAT GCGCTACTTC
GACACCGCGC CGATGTACGG CTCCGGACAC TCCGAGCGTC TGCTGGGCTT GGCTCTGCGC
GGTCGGCCGC GTGGCGAATA CGTGCTGAGC ACCAAGGTCG GGCGCCTGGT CCGACCTTCG
CATCCCGACA CCGCGACGAC CGGCGCGCCC TGGATCTACG ACTTCAGCCG CGAGGGCATC
CTGACCTCGC TGGAGGAGAG CCTGCTGCGG CTCGGCGTCG AGAGCGTGGA CATGGTCTAC
ATCCACGATC CCGACGACCA CTGGCGCGAA GCCCTGGACG AAGCGTGGCC GACCGTGGCC
CGGTTGCGTG ACGAGGGAGT GGTCCGCGCG GTCGGCGTCG GCATGGTCCA GGCGCCGATG
CTGGCCCGCT TCATCCGCGA GACCGACATC GACCTGGTGC TCGCCGCCGG GGTCTACACC
CTGCTCGACA CCCAGGCGAT CGACGACCTG CTGCCCGAGG CCGAGCGCCG CGGCGTCACC
GTCGTCGCGG CGCAGTCCCT GCACGGCGGG CTCATCGACG GCGTCGCGGA GCCCATGTTC
CGCTACCGTC CGGTCGATGA GCAGACCCGT GCCAAGACGG CGCGTATTGC AAAGGTCTGT
CATGAATTCG GACTGCCGAC CGCAGCCGTA GCTCTGCAAT TCCCTAGGGG ACATCCCTCT
GTCGGATGTG TCCTCACCGG TCCCGCATCG CGCGAGCAAT TGACGGAGAA CCTGGCCTGG
GCCGCGCAGC CGATACCGCC TGAAGTCTGG GCCCGCCTGC GAGAAGAGGG ACTGCTGCCG
CCGGAGGTTC CGGTCCCCTC GCGGTGA
 
Protein sequence
MTVDLPRLGF GAAAIANEGV GLGQALDCVD AAWDSGMRYF DTAPMYGSGH SERLLGLALR 
GRPRGEYVLS TKVGRLVRPS HPDTATTGAP WIYDFSREGI LTSLEESLLR LGVESVDMVY
IHDPDDHWRE ALDEAWPTVA RLRDEGVVRA VGVGMVQAPM LARFIRETDI DLVLAAGVYT
LLDTQAIDDL LPEAERRGVT VVAAQSLHGG LIDGVAEPMF RYRPVDEQTR AKTARIAKVC
HEFGLPTAAV ALQFPRGHPS VGCVLTGPAS REQLTENLAW AAQPIPPEVW ARLREEGLLP
PEVPVPSR