| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5094 |
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| Symbol | |
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| ID | 8336448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5849697 |
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| End bp | 5851457 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644958193 |
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| Product | 3-ketosteroid-delta-1-dehydrogenase |
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| Protein accession | YP_003115795 |
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| Protein GI | 256394231 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0693824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.136582 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTGC ACGGAACCCC GGACCTCTCC CGCCGCCGCG TCCTTCAGGG CGCCGCCGCG
GGCACCGCAG CTCTGTTCGG CGCGGGGGTG GCGACCGGCG CGAACGCCTA CGCCGATGCT
CCCGTCCTGG GCACGTACGA CGTCGTGGTG GTCGGCTGCG GCGCGGCCGG AATGACCGCC
GCGCTGACCG TGGCCGCACG CGGGCTGTCG GTGGTCGTCG TGGAGAAGGC GCCGACGTTC
GGCGGCTCGG CGGCGCGCTC GGGAGCCGGG ATCTGGCTCC CCAACAACTC GGTGATCCTG
GCCGCCGGCG TCCCCGACAC CCCGGCGCTG GCCGCGCAGT ACCTGGCCGC CGTGGTCGGC
GACGGCTCGA CCCCGGCGCG CCAGCACGCT TTCCTGAGCA CCGGACCGGC GATGCTGTCG
TTCGTCATGG CGCACAGTCC GTGCCGCTTC AAGTGGATGG ACGGCTACTC CGACTACTAT
CCGGAGCTTC CCGGCGGGAT GCCCGGCGGC CGCTCGATCG AGCCCGACGT GATCGACGGC
CACATCCTCG GCGCCGAACT CGCGCACCTG AACCCGGCCT ACCTCCCGGT CCCGGCCGGG
CTCGTGGTGT TCAGCCAGGA CTACAAGTGG ATCAACCTCG CCGCGGTCAA CGCCAAGGGC
ACGGCGGTCG CCGCCGAGGC TGCCGCTCGC GGAGCCGCCG CCGCGCTCGC CGGTCAGAAG
CCGCTGACGA TGGGCCAGTC GCTGGCCACC GGGCTGCGCG CCGGACTGAT GCAGGCCGGG
GTTTCGGTTC TGCTGAACAC GCCGCTGACG GACCTGAACA TCGTCAACGG ACGGGCGACC
GGCGTCGTGG TCACGCAGAA CGGCGCGCCC GGCGTGATCA CCGCGCGCCG AGGCGTCATC
GTCGGCTCCG GCGGCTTCGA GCACAACGCC GCGATGCGCG CGCAGTACCA GCAGCAGCCG
ATCGGGACGA CGTGGAGCGT CGGCGCCAAG GAGAACACCG GCGACGGCAT CCTGGCCGGG
CAGCGCGCCG GCGCCGCCTT GGCGCTGATG GACGACGCGT GGTGGGGTCC GACGATCCCC
AGCGGCGACG GGCCGTACTT CTGCCTGGCA GAACGGACGC TGCCCGGCGG GCTGATCGTC
AACCAGACCG GCCACCGGTT CGTCGACGAG GCGGCGCCGT ACGTGGACGT CGTGCACACG
ATGTACCGGC AGAACGCCAC GGCGGCGGAC ATCCCGTCCT GGCTGATCAT CGACCAGAAC
TTCCGCGACC GCTACGTCTT CCGGGACATC CTGCCGACCC TTCCGTTCCC CGCCTCGTGG
TACCAGAACG GCTCGGTCTA CAGGGACCTG ACCCTGTGGG GTCTGGCGAA CCAGATCGGA
GTCTCGCCCT CGACGCTGAC GAACACCGTC GCGCACTTCA ACGGACTGGC GATCACCGGC
AAGGACACCG ACTACGGCCG CGGCGTCAGC GTCTACGACC ACTACTACAC CGACCCGGCG
ATCTCCCCGA ACTCCTGCCT GGCGCCCCTG TGGCTCGCAC CGTTCTACGC ACTGAAGATC
GTCCCCGGCG ACCTCGGCAC GAAGGGCGGC ATGGTCACCG ACGAGCGAGC CCGCGTACTC
CGCGCCGACG GCTCGGTCAT CGGCGGCCTG TACGCGGCAG GCAACGCCAG CGCCGCCGTC
ATGGGACACA GCTACGCCGG CGCCGGCTCG ACGATCGGGC CCGCGATGAC CTTCGGGTAC
ATCGCGGGCA ATGACATCTA G
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| Protein sequence | MPVHGTPDLS RRRVLQGAAA GTAALFGAGV ATGANAYADA PVLGTYDVVV VGCGAAGMTA
ALTVAARGLS VVVVEKAPTF GGSAARSGAG IWLPNNSVIL AAGVPDTPAL AAQYLAAVVG
DGSTPARQHA FLSTGPAMLS FVMAHSPCRF KWMDGYSDYY PELPGGMPGG RSIEPDVIDG
HILGAELAHL NPAYLPVPAG LVVFSQDYKW INLAAVNAKG TAVAAEAAAR GAAAALAGQK
PLTMGQSLAT GLRAGLMQAG VSVLLNTPLT DLNIVNGRAT GVVVTQNGAP GVITARRGVI
VGSGGFEHNA AMRAQYQQQP IGTTWSVGAK ENTGDGILAG QRAGAALALM DDAWWGPTIP
SGDGPYFCLA ERTLPGGLIV NQTGHRFVDE AAPYVDVVHT MYRQNATAAD IPSWLIIDQN
FRDRYVFRDI LPTLPFPASW YQNGSVYRDL TLWGLANQIG VSPSTLTNTV AHFNGLAITG
KDTDYGRGVS VYDHYYTDPA ISPNSCLAPL WLAPFYALKI VPGDLGTKGG MVTDERARVL
RADGSVIGGL YAAGNASAAV MGHSYAGAGS TIGPAMTFGY IAGNDI
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