Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5056 |
Symbol | |
ID | 8336410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5803919 |
End bp | 5804794 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644958155 |
Product | UspA domain protein |
Protein accession | YP_003115757 |
Protein GI | 256394193 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.466483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCTC CCGTCGTCGT CGGCATCGAC GACATGGACC AGAGCCCCCA CGCGCTGGAG CTGGCGGGCA TCGAGGCCGA ACTGCGCGAC GCGCCGCTAT GGGTCGCCCA CGCCTACCAC CGGGTCCCGC CGGTGGTCAC GGCCGCCGCC GACGGCAGCG CCCCGACCGC GCACGCGGCG CTGGAATCGA CCGCGGAACC GCTGGCCACA GCCCTGAAAC AGCTCCACGC CGACCATCCG CGCCTGCAAG TCCGCAGCTA CGCGATGAGC GGACCGGCCG CTGCCGGGCT CGCCGCCTTG GCCGAGGAAG CCGAGCTGCT CGTGCTGGGC CACCGCGGCC GCGGTGGCTT CGCCGGCATG CTGCTGGGCT CGGTCGCGCT GCGTACCGTG GCGCACGCCC GCTGCCTGGT GGTGGTCGCG CGCGGCGCCC GGCGGGCCAT GAAGCGCGTG GTCGTCGGCA TCGACGTCGA CGACGCCACC GCCGGTCGGG CCCAACTCGC CTTCGCCTTC GAGGAGGCAG TCCTGCGCGG CGCGGAGCTG GTCGTGCTGC ACACCTGGGA GGATCCTGGC GCGTTCTATC CCGACCCCAC CGGCGACTAC ACGCGCGACC ACCTCGCGAC GCTCGACGAC GACCACCGCC AGCGCCTGCA CGCGGCACTG AAGCCGTGGC GGGCGGCGAA TCCCGACGTC GCGGTCGACG TCCGGGTCGA GGGCGGTTCC GCCGCCCGGC ATTTGGTCGA AGCCAGCAGC CACGCCGATC TGCTGATCGT CGGCGGCCGT CTGCGCCGCG ACGGCGACGG CATGCGTCTG GGAGCTCTGG CCTATTCGCT GCTGCACCAC GCGCGATCCC CGGTGGTCAT CGTTCCGGAG CGGTGA
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Protein sequence | MIAPVVVGID DMDQSPHALE LAGIEAELRD APLWVAHAYH RVPPVVTAAA DGSAPTAHAA LESTAEPLAT ALKQLHADHP RLQVRSYAMS GPAAAGLAAL AEEAELLVLG HRGRGGFAGM LLGSVALRTV AHARCLVVVA RGARRAMKRV VVGIDVDDAT AGRAQLAFAF EEAVLRGAEL VVLHTWEDPG AFYPDPTGDY TRDHLATLDD DHRQRLHAAL KPWRAANPDV AVDVRVEGGS AARHLVEASS HADLLIVGGR LRRDGDGMRL GALAYSLLHH ARSPVVIVPE R
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