Gene Caci_5020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5020 
Symbol 
ID8336374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5747362 
End bp5751552 
Gene Length4191 bp 
Protein Length1396 aa 
Translation table11 
GC content70% 
IMG OID644958119 
Productmolybdopterin oxidoreductase 
Protein accessionYP_003115721 
Protein GI256394157 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0369] Sulfite reductase, alpha subunit (flavoprotein) 
TIGRFAM ID[TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGAGCG TGCACGCCGA GGTGGACCAG GTGCGCTCGG TGTGCTCCTA CTGCGGCGTC 
GGCTGCGGGA TCGTCCTGGA TGTGGCGTCG GGCCCGGACG GTCGGCGGAT CGTCGCCAAG
GCCTCCGGGG ACAAGGCCCA CCCGGCGAAC GGCGGCAGGC TGTGCACCAA GGGCGCGACC
AGCGCGGACA TGCTCGCCGC TCCCGGTCGC CTGACGCGTC CCCTCCTGCG CGCCGACCGC
GGCGCCGAGC CGGAAGCCGC CGGTATGGAC GACGCCATCG CCGAGACCGC CCGCCGCCTC
CGGGCGATCC TGGACGAGCA CGGTCCGGAC GCCCTGGCGT TCTACGTCTC CGGCCAGATG
TCACTGGAAG CCCAGTACCT GGCCAACAAG CTGGCCAAGG GATTCGTGCG CACCAGCCGG
ATCGAATCCA ACTCGCGGCT GTGCATGGCC AGCGCCGGCA GCGGCTACAA GCTCTCCCTC
GGCGCCGACG GCCCGCCCGG CTCGTATCAG GACTTTGAGC ACGCGGATGC GTTCTTCGTC
ATCGGCGCCA ACATGGCCGA CTGCCACCCG ATCCTGTTCC TGCGGCTGCT GGAGCGCCGC
AAGTCCGGGG CGAAGCTGAT CGTCGTGGAC CCGCGGCGCA GTGCCACCGC CGACAAGGCC
GATCTGTTCC TGCAGATCAA GCCCGGCACC GACTTGGCGC TTCTCAACGG CCTGCTCCAC
CTGCTGGTCG AGAACGGCCA CATCGACGAG GAGTTTATCG CCGCGCACAC CGAGGGCTGG
GACGACATGC TCGGCTTCCT CGCCGACTAC AGCCCCGCGT ACGTCGCCGA CGTCACCGGC
ATCCCCGAAG CCGACATCCG CCTGGCCGCG CAGTGGATCG GCGAGGCGGG CGAGTGGATG
AGCTGCTGGA CGATGGGCCT GAACCAGTCG ACCCACGGCA CATGGAACAC CAACGCCCTG
GTGAACCTGC ACCTGGCCAC CGGCGCGATC TGCCGTCCCG GCAGCGGTCC GTTCTCCCTG
ACCGGCCAGC CCAACGCGAT GGGCGGTCGC GAGATGGGCT ACATGGGTCC GGGTCTGCCC
GGTCAGCGTT CTGCGATGGT GCCCGAGGAG CGCGCCTTCG TCGAGGAACT GTGGAATGTG
CCCGCCGGGA CGCTCCGCGC CGAGGCGGGT CAGGGCACTG TCGAGATGTT CGGGGAGATG
GCCGCTGGGC GGATCAAGGC TTGCTGGATC ATCTGTACCA ACCCGGTCGC CTCCGTGGCC
AACCGCAAGA CCGTCATCGC CGGCTTGGAA GCCGCCGAGC TGGTCATCAC CCAGGACGTC
TTCGCCGACA CCGAGACCAA CGCCTACGCC GACATCGCGC TGCCGGCGGC GCTGTGGGCC
GAGGCCGAGG GCGTGATGGT CAACTCCGAG CGCAACCTCA CGCTCGTCCG CAAAGCCATC
GACCCGCCCG GCGAGGCGAT ACCGGACTGG CAGATCATCG CGCGCGTCGC CTGCGCGATG
GGGTTCCAGG AGGCGTTCAC CTACGGCAGC GCCGAGGAGG TCTTCGAGGA GATCAAGCGC
GCCTGGAATC CCAAGACCGG CTGGGACATT CGCGGCGTCA GCTATCAGCG ACTGCGCCAG
AGCCCGGTGC AGTGGCCCAG CGCCGACGCC GACGGCCCGG ACCGCAACCC CATCCGCTAC
CTCAACGACG GCGTCAGCCA GACCGAACTG ATCCACCCCG ACGGCACCAA GCCGCGGCTG
GCCTTCCCGA CTGCCAGCGG CCGAGCGGTC TTCTTCGCCC GACCGCATCT GCCCGCCGCC
GAGCTTCCGG ACGACGACTA CCCCTTCGTC CTGAACACCG GCCGTCTCCA ACACCAGTGG
CACACCCTGA CCAAGACCGG GAAAGTGGCC AAACTCAGCA AGCTGAATCC CGGGCCTTTC
GTCGAGATCC ACCCGCAGGA CGCCGACGCG CTCCAGGTCG CCGACGGCGA TCCGGTGGCC
GTGGTCTCCC GGCGCGGACG CGCGGTGCTG CCTGCGGTGG TCACCGATCG CGTGCGGCCC
GGGAACTGCT TCGCGCCGTT CCACTGGAAC GACCTGTTCG GGGAGTACCT GAGCGTCAAC
GCGGTCACCA ACGACGCCGT CGACCCGATC TCCTTCCAGC CCGAGTTCAA GGTGTGCGCG
GTCACGCTGG CCAAGGCGCC GACGGTCACG ACCACGTCCC CTGCGACGCC GACCGAGCGG
CGGGAGACTC CCGTTCCACC GACGGCGCGC GCCGCGACAG CGCTCCCGGC GCGCGCGGTG
CTCGGGGTGA CGGCGCTCGC CGACCTCTTC GACCTCGACC TGACTCCGAT CGCACTCGCC
GACGGCGAAC GCCGGTACCT GTCGGGCTTC CTGACCGGTC TCGCCTCGTC GGAGGTCGCG
GGCAGCGCCG TGCCGGTCCT GCCTCGCACC TCGCCGTTCA CAGCCGAGAA CGCCCTGTGG
GTCGACGGCG TCCTGGCTGG AATGTTCTCG CGGCTGGACG CTGCTCCCAG CGGCGCGCGA
GTGCCGGACA CCCCGCCGGA AGAGGACGGC GGCAGCGTGC CGACCCGCGA GGTCGTCGTG
CTGTGGGCTT CGCAGACCGG CAACGCCGAA GAGGTCGCGG GCACCGTCAA CCGCAGACTG
GCCGAAGCCG GACGGCGCGC GTCGCTGCGA GCGATGGACG CCGCCTCGCT CGCCTCGTTG
CGCTCCGGAA CCGATGTGCT CGTCGTCACC AGCACCTTCG GGGACGGCGA TTCCCCCGAC
AACGGCGCGG AGTTCTGGCA GAGCCTCACC GCCGCCGACG CCGCAGCCCT GGACGACGTC
CGCTACGCCG TGCTGGCGTT GGGCGACTCG AACTACGACG ACTTCTGCGG CCACGGCCGC
CGCCTCGACG AGCGCCTGGC CGAACTCGGC GGCCGGCGGC TGCTCCCGCG CGTCGAGTGC
GAGCCGGATT TCGAGGAGCC GTCACGAGTC TGGCTCGACG AGGTTCTCAG CCTGTTGAAT
TCCAGTATCG GTACCGGAAC CCTTCCGGAA CCGGTCACCG TGCCGGTGGC GACCCCCGCC
GCCACGGATA CGGCTCGCCC CACCAAGGCG AACCCCTTCA CCGCCGCACT GGCGGGCAAC
CGTCTGCTGA GTTTGCCGGG CGCCGCCAAA GAGGTACGCC AATTCTCCTT CGACACCAGC
GCCGGCGAAC TCGCCTACGA GGCCGGCGAC GCCCTCGGCG TCTGGCCGCG GAACTGCCCG
GACCTGGTCG CCGAGTGGCT GGCCGTCACC GGCTTGGACC CCCGCGCCGA GGTCGCCGTC
TCCGGATCGG ATGCCGTGCC GCTGTCGGAG GCACTGCTGC GCCATCTGGA CATCACCCGC
ATCAGCAGCG ACCTGCTGCG CCTGGCCTCC GAGCACGATC GCGACCTCAA GCGCCTGCTG
CGCCCGGACA ACAAGGGCGA GCTCGCCAAA TGGAGTTGGG ACCGCCAGGC GGTCGACGTC
GTCAGCGAGT TCCCGATCCG CCTGAGCGCG CAGGAGTGGG CCGAGATCCT CAAGCCGCTC
CAGCCGCGCA TGTACTCCAT ATCCTCCAGC CCGCTCGCCG ATCCGCAGGC GCTGAAGCTG
ACCGTCTCAG TGCACCGCTT CGAGAGCCGG ACGGGGCGCC CGCGCAAGGG CGTCGCCTCG
ACCTTCCTCG CCGACGCCGA ACCGAACAGC CCGGTCGACG TCTTCGTCCA GCGCCAGGCG
CACTTCCGGC CGCCGACCGA CCCCGCGACC CCCATGATCA TGGTCGGTCC CGGGACCGGC
GTCGCGCCGT TCCTCGGCTT CCTGGCCGAG CGGCGCGCCC GGGACCACCA CGGACGCAAC
TGGCTGTTCT TCGGCGAACA GCGCCGCGCC ACCGACTTCT ACTACCGCGA CGAACTCGAC
GAACTGCACC GGCACGGCAC CCTGACCCAG CTGGACCTCG CCTTCTCCCG GGACCAGCGG
GCCAAGGTCT ACGTCCAGGA CCGCATGCGC GACCACGGCG CGCAGCTGTG GTCCTGGCTG
CAGGACGGCG CGCACTTCTA CGTCTGCGGC GATGCCAACC GCATGGCCAA GGACGTCGAC
CAGGCCCTGC GGGACATCGC CGCCGTCCAC GGCGGCCTCG GCCAGGAGTC GGCAGCCGCG
TACGTCAAGC AGCTCGCCGC CGAGAAGCGA TACGCGAGGG ACGTCTACTA G
 
Protein sequence
MTSVHAEVDQ VRSVCSYCGV GCGIVLDVAS GPDGRRIVAK ASGDKAHPAN GGRLCTKGAT 
SADMLAAPGR LTRPLLRADR GAEPEAAGMD DAIAETARRL RAILDEHGPD ALAFYVSGQM
SLEAQYLANK LAKGFVRTSR IESNSRLCMA SAGSGYKLSL GADGPPGSYQ DFEHADAFFV
IGANMADCHP ILFLRLLERR KSGAKLIVVD PRRSATADKA DLFLQIKPGT DLALLNGLLH
LLVENGHIDE EFIAAHTEGW DDMLGFLADY SPAYVADVTG IPEADIRLAA QWIGEAGEWM
SCWTMGLNQS THGTWNTNAL VNLHLATGAI CRPGSGPFSL TGQPNAMGGR EMGYMGPGLP
GQRSAMVPEE RAFVEELWNV PAGTLRAEAG QGTVEMFGEM AAGRIKACWI ICTNPVASVA
NRKTVIAGLE AAELVITQDV FADTETNAYA DIALPAALWA EAEGVMVNSE RNLTLVRKAI
DPPGEAIPDW QIIARVACAM GFQEAFTYGS AEEVFEEIKR AWNPKTGWDI RGVSYQRLRQ
SPVQWPSADA DGPDRNPIRY LNDGVSQTEL IHPDGTKPRL AFPTASGRAV FFARPHLPAA
ELPDDDYPFV LNTGRLQHQW HTLTKTGKVA KLSKLNPGPF VEIHPQDADA LQVADGDPVA
VVSRRGRAVL PAVVTDRVRP GNCFAPFHWN DLFGEYLSVN AVTNDAVDPI SFQPEFKVCA
VTLAKAPTVT TTSPATPTER RETPVPPTAR AATALPARAV LGVTALADLF DLDLTPIALA
DGERRYLSGF LTGLASSEVA GSAVPVLPRT SPFTAENALW VDGVLAGMFS RLDAAPSGAR
VPDTPPEEDG GSVPTREVVV LWASQTGNAE EVAGTVNRRL AEAGRRASLR AMDAASLASL
RSGTDVLVVT STFGDGDSPD NGAEFWQSLT AADAAALDDV RYAVLALGDS NYDDFCGHGR
RLDERLAELG GRRLLPRVEC EPDFEEPSRV WLDEVLSLLN SSIGTGTLPE PVTVPVATPA
ATDTARPTKA NPFTAALAGN RLLSLPGAAK EVRQFSFDTS AGELAYEAGD ALGVWPRNCP
DLVAEWLAVT GLDPRAEVAV SGSDAVPLSE ALLRHLDITR ISSDLLRLAS EHDRDLKRLL
RPDNKGELAK WSWDRQAVDV VSEFPIRLSA QEWAEILKPL QPRMYSISSS PLADPQALKL
TVSVHRFESR TGRPRKGVAS TFLADAEPNS PVDVFVQRQA HFRPPTDPAT PMIMVGPGTG
VAPFLGFLAE RRARDHHGRN WLFFGEQRRA TDFYYRDELD ELHRHGTLTQ LDLAFSRDQR
AKVYVQDRMR DHGAQLWSWL QDGAHFYVCG DANRMAKDVD QALRDIAAVH GGLGQESAAA
YVKQLAAEKR YARDVY