| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4928 |
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| Symbol | |
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| ID | 8336282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5621060 |
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| End bp | 5622532 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644958027 |
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| Product | glycoside hydrolase family 10 |
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| Protein accession | YP_003115629 |
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| Protein GI | 256394065 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.870217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCTG GCAGAATCCC GGCACGGCGC GGGCTCGCCC GCGGCCTGGC CATGACCGCG
GCAGCCGTCC TGGCCATCCC CGTGGCAGCG GCTCTCACCG TCCAGCCGGC CACCGCGGCG
ACCTCCTTGC GCGGCTTGGC CGAAGCACAG AACCGGTATT TCGGCACCGC CCTGACCGAC
GGCGACCTGA ACAACAGCGC GGAGACGAAC ATCGCCGGGC CCCAGTTCGA CATGGTGACG
CCCGGCAACG AGATGAAGTG GGACACCACC GAGCCCTCGA ACGGCTCCTA CAACTTCGGT
CCCGGCGACC AGATCCTGTC CTGGGCGCAG GCGCACAACG ACCGGGTGCG CGGCCACAAC
CTGGTCTGGC ACAGCCAGCT GCCGGGGTGG GTGAACAGCC TGCCGCAGAA CCAGGTCCAG
GGCGCCATGG AAGCGCACAT CACCACCGAG GCGACGCACT ACAAGGGCAA GCTCTACGCC
TGGGACGTCG TCAACGAGCC CTTCAACGAG GACGGCAGCC TCCGCCAGGA CGTCTTCGAC
AAGGCGATGG GCACCAACTA CATCGCCGAC GCCATCCGCA CGGCGCACGC CGCGGACCCG
AACGCCAAGC TCTACCTGAA CGACTACAAC ATCGAAGGGG AGAACGCCAA GAGCGACGGC
ATGTACAACC TGGCCAAGTC GCTGCTGTCC CAGGGCGTGC CGCTGAACGG CATCGGCTTG
GAGAGCCACT TCATCGTCGG CCAGGTGCCC TCGACGATGC AGGCGAACAT GCAGCGCTTC
GCAGCCCTGG GCCTGGACGT GGCGGTGACA GAGCTCGACG ACCGCATCCA GCTTCCGGCC
AGCTCGGCGA ATCTCCAGCA GCAGGCCGCC GACTACGCGA ACATCGTCAA GGACTGCCTG
GCCGTCAGCC GCTGCGTCGG CATCTCGCAG TGGGGCGTGG ACGACGGGAA CTCCTGGATC
CCGGGCACCT TCCCCGGCTA CGGCGCGGCC ACCATGTACG ACCAGAACTT CCAGCCCAAG
CCCGCTTACA ACTCCACGGT GAGCGCTCTG GGCGGCGGCT CCACGCCTCC GCCGCCGAGC
GGAGGCGCGC TGCACGCGGT GGGCGCGGGC AAGTGTGTGG ACGTGCCCAA CTCGACCACG
ACCAGTGGCA CGCAGGTGCA GATCTACTCC TGCGACGGCC AGGCGAATCA GGCCTTCACC
CACAACTCCG CCGGTGAGCT GGCCGTCACC GACGCCGGAG TCACCGACTG CCTGGACGCC
AACGGCAAGG GAACCACCAA CGGCACCAAG GTGATCATCT ATCCCTGCAA CGGCCAGCCC
AACCAGCAAT GGACGATCAA CTCCAACGGC ACCATCACCG GCGTCCAATC AGGACTCTGC
CTCGACGTCA CCGGCGCATC CACCGCCAAC GGCGCCCTGG TCGAACTGTG GACCTGCAAC
GGCGGCAGCA ACCAGCAATG GACCCTGAGC TGA
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| Protein sequence | MIPGRIPARR GLARGLAMTA AAVLAIPVAA ALTVQPATAA TSLRGLAEAQ NRYFGTALTD
GDLNNSAETN IAGPQFDMVT PGNEMKWDTT EPSNGSYNFG PGDQILSWAQ AHNDRVRGHN
LVWHSQLPGW VNSLPQNQVQ GAMEAHITTE ATHYKGKLYA WDVVNEPFNE DGSLRQDVFD
KAMGTNYIAD AIRTAHAADP NAKLYLNDYN IEGENAKSDG MYNLAKSLLS QGVPLNGIGL
ESHFIVGQVP STMQANMQRF AALGLDVAVT ELDDRIQLPA SSANLQQQAA DYANIVKDCL
AVSRCVGISQ WGVDDGNSWI PGTFPGYGAA TMYDQNFQPK PAYNSTVSAL GGGSTPPPPS
GGALHAVGAG KCVDVPNSTT TSGTQVQIYS CDGQANQAFT HNSAGELAVT DAGVTDCLDA
NGKGTTNGTK VIIYPCNGQP NQQWTINSNG TITGVQSGLC LDVTGASTAN GALVELWTCN
GGSNQQWTLS
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