| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4922 |
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| Symbol | |
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| ID | 8336276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5611964 |
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| End bp | 5613016 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644958021 |
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| Product | sugar ABC transporter substrate-binding protein |
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| Protein accession | YP_003115623 |
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| Protein GI | 256394059 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.180738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTCA GGCTCCTGGC CGCGGGTACC GCGGCGGTTC TGTCCGTCAG CGCGCTGACG
GCGTGCTCCA GCAGCAAGAA CAGTAGCGGC GGCAAAGCGG TCGTCGGCGT GGACTACCCG
CGTTCGGACA CCGACTTCTG GAACTCCTAC ATCCAGTACA CCCCGCAGTT CGCCTCCCAG
CTCGGCCTGT CGATCAAGAC CAGCAACTCG CAGAACGACG TCGCCAAGCT CGCCGCGAAC
GCGCAGGCGT TCATGGCCGA GGGCGTCAAG GGCGTGGTCA TGGCGCCGCA GGACACCGCG
GCGATCGCGC CCACGCTCAG CCAGCTCGCC GCCAAGAAGA TCCCGGTGGT CTCGGTCGAC
ACCCGGCCCG ACACCGGCTC GGTCTACATG GTGGTGCGCG CCGACAACCG CGCCTACGGC
ACCAAGGCGT GCCAGTTCCT CGGCACGAAG CTGTCCGGCA AGGGCTCGGT GGTCATGCTG
GAGGGCGACC TGTCCTCGAT CAACGGCCGC GACCGCACCG ACGCGTTCAA CGCCTGCATG
AAGCAGAGCT TCCCCGGCAT CACGGTCTAC GGCGAGGCCA CCAACTGGGA CGCCGCCACC
GCGGCGCAGA AACTGCAGAC CGACCTCACG GCGCACCCGG ACGTCAAGGG CGTCTACATG
GAATCCAGCT TCGCGTTGTC CGGCACGCTT CAGCTGCTCC AGCAGAAGGG CCTGATGGCT
CCGCCGAGCG ACCCCAAGCA CGTGTTCGTC GTCTCCAACG ACGGCATCCC CGAAGAGCTG
AAGGACATCG CGGCCGGCAA GATCGACGCC ACCGTGTCGC AGCCCGCGGA CCTGTACGCC
AAGTACGCGC TGTTCTATAT CCAGGCCGCG GTGCAGGGCA AGACCTTCAA GCCGGGCCCG
ACCGACCACG ACAGCACCAT CATCCAGGTC CGCGCGGGCC TGCTGGAGGA CCAGCTCTCC
GCCCCGCTGG TCACCGCCGA CGGCGGCGCA TACGGCGGCA TCGCGAGCCT GAAGAGCACC
GACACCTCGC TGTGGGGCAA CCACCTCGGC TGA
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| Protein sequence | MRFRLLAAGT AAVLSVSALT ACSSSKNSSG GKAVVGVDYP RSDTDFWNSY IQYTPQFASQ
LGLSIKTSNS QNDVAKLAAN AQAFMAEGVK GVVMAPQDTA AIAPTLSQLA AKKIPVVSVD
TRPDTGSVYM VVRADNRAYG TKACQFLGTK LSGKGSVVML EGDLSSINGR DRTDAFNACM
KQSFPGITVY GEATNWDAAT AAQKLQTDLT AHPDVKGVYM ESSFALSGTL QLLQQKGLMA
PPSDPKHVFV VSNDGIPEEL KDIAAGKIDA TVSQPADLYA KYALFYIQAA VQGKTFKPGP
TDHDSTIIQV RAGLLEDQLS APLVTADGGA YGGIASLKST DTSLWGNHLG
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