Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4899 |
Symbol | |
ID | 8336253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5583065 |
End bp | 5583895 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644957998 |
Product | transcriptional regulator, PaaX family |
Protein accession | YP_003115600 |
Protein GI | 256394036 |
COG category | [K] Transcription |
COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.425131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTACC CTGACCTGGT GAGCAGTCCC GAGTCTTCGC CGCGACCGCA GTCGCTGATG CTGACGTTCT TCGGCATCCA CGTCCTGGGA CGCGATCTCG CGATCTCCTC CGGCTCGGTC ATCGACGCTT TGGGGCGCGT CGAGGTCAGC GAGGAGGCGG TGCGCTCGAC GCTGACCCGC ATGGTCGGCA GAGGCCTGCT GGAGCGCCAC CGCCAAGGCC GCAAGATGTA CTTCGCGCTC ACGCCGCGGG CCGTGTCCGT GCTGCAGGAC GGCTACGACC GGATCTGGCA GCGAGGCGCG GCGAACTTGG ACTGGGACGG GCAGTGGACG CTGATCGGGT TCTCGCTGCC CGAGGCGTGG CGCCGCGAGC GGCATGATCT GCGCTCCCGG CTGACGTGGG GCGGGTTCGG GCCGCTGCAG AACGGGCTGT GGGTCGCGCC GTCGGACGTG GACGCCGCCG CCCTGCTCGG CGATCTGGGT CTGGACGCGC ACCTGCGGGT TTTCCGCGGC ACGATCGTGA AGCCGACGGA GGTCGCGACC GTGCTGGAGA CAGCCTTCGA CACCGCCGCG ATCGCCGCCG ACTACCAGGC GTTCCTGCGG CGCTGGTCGC AGCCCGGATC CGGCGTGGCG GACCCGCTGG GAAGCCAGCT GCTGCTGCAC ACCGACTGGC TGGAGCTGGT CCGGCGCGAC CCGCACCTGC CGGCTGAGCA TCTGCCCTCC GACTGGCCCG CCATTCAGGC CGAGGAGCTG TTCCACGCCC TCGCGCAGGA GCGGGAGGCC TCGGCGCGGG TCGAGGCCGA GCGGACGCTG GACACCCTGC GGCTGCGGTA G
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Protein sequence | MPYPDLVSSP ESSPRPQSLM LTFFGIHVLG RDLAISSGSV IDALGRVEVS EEAVRSTLTR MVGRGLLERH RQGRKMYFAL TPRAVSVLQD GYDRIWQRGA ANLDWDGQWT LIGFSLPEAW RRERHDLRSR LTWGGFGPLQ NGLWVAPSDV DAAALLGDLG LDAHLRVFRG TIVKPTEVAT VLETAFDTAA IAADYQAFLR RWSQPGSGVA DPLGSQLLLH TDWLELVRRD PHLPAEHLPS DWPAIQAEEL FHALAQEREA SARVEAERTL DTLRLR
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