Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4890 |
Symbol | |
ID | 8336244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5572790 |
End bp | 5573566 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644957989 |
Product | protocatechuate 3,4-dioxygenase, beta subunit |
Protein accession | YP_003115591 |
Protein GI | 256394027 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.833858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTGT CACAGCAGGA CATCTCTCGT GAGATCGCCG AGCGGGCCGA GGCGGCTGCG GCTGCGGATG CGACCGCAGC CGCGGACACC GAGCGGCTGC GCCACCACCC GGCGCGCGAC TACGCGCCCT ATCGCAGCAG CCTGTTGCGC CACCCCAAGC AGCCGCTGGT GACCGTCCGG GATCCCGAGG CGGTCGAGCT GTCCGGCCCG GTGTTCGGCG TCAGCGACGT CACCGAACTC GACGCCGACC TGACCCGGCA GCACCTGGGC GAACCGCTCG GCGAGCGGAT CACCGTGACC GGCCGGATCC TGGACCGCGA CGGCCGCCCC GTGCGGGGGC AGCTCGTCGA GATCTGGCAG GCCAACGCCT CCGGCCGCTA CCTGCACCAG CGCGATCAGC ACCCGGCGCC GCTCGATGCC AACTTCACCG GCGTGGGCCG CTGCCTGACC GACGGCGAGG GCGGCTACCG GTTCACCACG ATCAAGCCCG GCGCCTATCC CTGGCGCAAC CACACCAACG CCTGGCGGCC CGCGCACATC CACTTCTCGC TGTTCGGCAC GGCGTTCGCC CAGCGCCTGA TCACGCAGAT GTACTTCCCC GGCGACCCGC TCTTCCCCTA CGACCCCATC CTGCAGTCCG TCACCGACGC CGCCGCCCGG AACCGGCTGG TCGCCGCCTA CGAGCACGAG CTGTCCGCCG CCGAATGGTC GCTCGGCTAC CGCTGGGACA TCGTGCTCGA CGGTCCCGCC GCCACCTGGA CCGAAGAAGG ACGCTGA
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Protein sequence | MALSQQDISR EIAERAEAAA AADATAAADT ERLRHHPARD YAPYRSSLLR HPKQPLVTVR DPEAVELSGP VFGVSDVTEL DADLTRQHLG EPLGERITVT GRILDRDGRP VRGQLVEIWQ ANASGRYLHQ RDQHPAPLDA NFTGVGRCLT DGEGGYRFTT IKPGAYPWRN HTNAWRPAHI HFSLFGTAFA QRLITQMYFP GDPLFPYDPI LQSVTDAAAR NRLVAAYEHE LSAAEWSLGY RWDIVLDGPA ATWTEEGR
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