Gene Caci_4865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4865 
Symbol 
ID8336219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5534136 
End bp5535134 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content70% 
IMG OID644957964 
Producthypothetical protein 
Protein accessionYP_003115566 
Protein GI256394002 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1387] Histidinol phosphatase and related hydrolases of the PHP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.113999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCGG TCGAAGCCTT ACGGCGGATC GCCTTCCTGC TGGAGTGGCG CGGAGCTTCT 
CCGTACCGGG TGCGGGCTTT TCACACCGCT GCCGAGGCCG TCCACGGACT GCCGGCGGGT
CCGATCGACG CCGACGACGT GCAAGAGCTG CAGGGAGTCG GGCCTGTGAC CGCCGAGGTG
ATCGCCCAGG CCTCGACCGG CGCCGTACCG GCCTATCTGG TGCGCCTGAT GACGGATGCC
GGGCCGGAAG CCGAAGCCGG CTGGGATCTG GCGATGGCGG GCAAAGGCGA CTGCCACCTT
CATTCGGACT GGTCCGACGG CGGAAGCCCG ATCGAGGAGA TGGCTGAGGC GGCCCGCGCC
CTGGGCCATC GGTGGGCTGT TCTGACCGAC CACTCGCCGC GGCTCACCAT CGCCCACGGG
CTGAGTCCCG AGCGGCTGCG GCGCCAGTTG GACGTTGTGG CGGAGGTGAA CGCGCGTCAG
GACTCCGGGT TCCGGCTGCT GACCGGTATC GAGTGCGACA TCTTGGATGA CGGCTCCCTG
GATCAGGAGG AGGAGTTGCT CGATCGGCTC GATGTGGTCG TGGCGTCCGT GCACTCCAAA
CTGCGCTCCG AGCCCGAGGC GATGACCGCG CGGATGGTCG CTGCGGTGAG CAATCCGCAC
GTGGACGTCC TGGGGCACTG CACGGGTCGG ATCGTCACCG GCCGGGGTCG CCCGCAGTCC
CGCTTCGACG CCCAGGCCGT GTTCGCCGCC TGCGCCCGGG CCGGCACCGC GGTGGAAATC
AACTGCCGCC CCGAACGGCG CGACCCGCCG GACGACCTCC TGGCGCAGGC GGCGGAGGCA
GGCTGCCTGT TCGCGGTGGA TACCGATGCT CACGCTCCCG ACCAGTTGTC GTGGCAGTCC
TCGGGGTACG CGCGTGCGGC ACGGGCCGGG CTAGAAGCAG AGCGGCTGGT GACGACCTGG
TCTCTGGAGC GGTTGCGGGA CTGGACGAAA TGTCTCTGA
 
Protein sequence
MDPVEALRRI AFLLEWRGAS PYRVRAFHTA AEAVHGLPAG PIDADDVQEL QGVGPVTAEV 
IAQASTGAVP AYLVRLMTDA GPEAEAGWDL AMAGKGDCHL HSDWSDGGSP IEEMAEAARA
LGHRWAVLTD HSPRLTIAHG LSPERLRRQL DVVAEVNARQ DSGFRLLTGI ECDILDDGSL
DQEEELLDRL DVVVASVHSK LRSEPEAMTA RMVAAVSNPH VDVLGHCTGR IVTGRGRPQS
RFDAQAVFAA CARAGTAVEI NCRPERRDPP DDLLAQAAEA GCLFAVDTDA HAPDQLSWQS
SGYARAARAG LEAERLVTTW SLERLRDWTK CL