Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4862 |
Symbol | |
ID | 8336216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5531133 |
End bp | 5532545 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644957961 |
Product | Beta-carotene 15,15'-monooxygenase |
Protein accession | YP_003115563 |
Protein GI | 256393999 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.169022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCG ACTACGACCC GGGCTTCACC AGCCTGGCCA CCGAAGTGGA AGAACTCGCC CTGCCGGTCG CCGGCGAGCT GCCCGCCTGG CTGTCCGGGA CCCTGTTCCG GAACGGGCCG GCACGGTTCG AAGGGGGCGA GGTCCCCTTC CGGCACTGGT TCGACGGACA GGCGATGCTG CATCGCTTCG CCATCGCGGA CGGCGCTGTC ACCTACACCA ACCGCTTCAT CGACTCCGCG AGCAAGCGGG CCACCGACGC CGGCCGGATC GACTACACCG AATTCGCCAC CGATCCCTGC CAGCGCTACT TCTCCCGCAT GTTCACCCGG TTCCGGTCGA ACACCCGGGA TGTGCAGAAC GCGAACGTCA ACGTCGCGCC CCTGGCCGAG GGCATGGTCG CGCTCACCGA AGTGCCGCTG GCAGCGCTCT TCGACCCCGA GACGCTCGCC ACCGCCGGCA TCGCCGCCTA CCGCGACGAC CTCCAGGGCC AGGTCACCAC CGCGCATCCG CATCAGGACC CGCGCACCGG CGACCTGGTG AACTACCTGC TGTCCTTCGG CCGCAAGAGC TTCTACCAGG TCTACCGGCA AGCGCCGACG AGCATGACCC GTGAGCTGGT CACCCGGATC CCGGTGGCCC GGCCCGGCTA CATGCACAGC TTCGCGATCA CCGAGAACCA CGTCGTGCTC GCGGAGTACC CCCTGACAGT CAACCCCCTG ATACTGCTGC TGTCCGGGAA GCCGTTCATC GACAACTATC GCTGGAACGC CCGCGGCACC ACGCGCTTCC TCGTCGTCGA CACGCGCGAC GGCTCACTGC GCGGGGAGTT CCACAGCGAA CCCTTCTTCG CCTTCCACCA CATCAACGCC TTCGAGGACG GCGACAAGCT GTTCCTCGAC ATCTGCGCCT ACCGGGACGC CTCGGTCATC GACGCGCTCT ATCTCGACGC CCTCGCCAAG GAGGTACCCG GCGACTTCCC CTACCCGACG CGGTTCGAGA TCGACCTGAC CACCGGGAAA GTGAGCTCGC GCCGCCTGGC AGACGTCACC CTGGAACTCC CGCGCATCCA CCACGGGCAG CACAACGGAC GCCCGTACCG CTACGCGTAC GGGATCACCG GCGACAGCGT AGGACCTGTG GTGGCCCGCG GGCTGGTCAA GGTGGATGTG GAGAGCGGCC AGAGCAAGCA ATGGTCCCAG CCGCGGAGCT ACCCCGGGGA GCCGGTGTTC GTACCCGCAC CCGGCGCGCT CGCCGAGGAC GAGGGCGTGG TGCTGTCGGT GGTACTCGAC GGTGAAGCCG GCACGTCCAG GCTCGTGGTC CTGGACGCGC AGTCGTTCCA GGAGGTGGCT TCAGCCACGG TTCCGCACGC GATCCCGTTC GGGTTCCACG GATTGTTCCA CCGAGGACTG TGA
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Protein sequence | MATDYDPGFT SLATEVEELA LPVAGELPAW LSGTLFRNGP ARFEGGEVPF RHWFDGQAML HRFAIADGAV TYTNRFIDSA SKRATDAGRI DYTEFATDPC QRYFSRMFTR FRSNTRDVQN ANVNVAPLAE GMVALTEVPL AALFDPETLA TAGIAAYRDD LQGQVTTAHP HQDPRTGDLV NYLLSFGRKS FYQVYRQAPT SMTRELVTRI PVARPGYMHS FAITENHVVL AEYPLTVNPL ILLLSGKPFI DNYRWNARGT TRFLVVDTRD GSLRGEFHSE PFFAFHHINA FEDGDKLFLD ICAYRDASVI DALYLDALAK EVPGDFPYPT RFEIDLTTGK VSSRRLADVT LELPRIHHGQ HNGRPYRYAY GITGDSVGPV VARGLVKVDV ESGQSKQWSQ PRSYPGEPVF VPAPGALAED EGVVLSVVLD GEAGTSRLVV LDAQSFQEVA SATVPHAIPF GFHGLFHRGL
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