| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4824 |
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| Symbol | |
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| ID | 8336178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5498681 |
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| End bp | 5500240 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644957924 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003115526 |
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| Protein GI | 256393962 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCTG CTGCTCCGAA CGCAGCCGCG GCCCCGCTCG GCGGCCGCGC CACCATCAAC
CGCAGCGCGG CGCTGGCGCT GCTCGCGGTC ACCCAGTTCG TCTTGGTCCT GGACGCCGGC
ATCGTCGGCG TCGCGCTTCC CTCACTGGTC AAGGGCCTGG GCTTCCAGCA GGCCGACCTG
TCCTGGGTCA CCAACGCCTA CACCCTGATG TTCGGCGGCT TCCTGCTCCT GGGCGGGCGG
CTGGCCGACT ACCTCGGCCG CCGCCGGATG TTCATGGGCG GTCTGATCCT GTTCTCCGTC
GCCTCGCTGG CCGGCTCGCT GTCGCCGGAC CCGGGCTTCC TGATCGGCGC GCGGGCCGTC
CAAGGCTTCG CCGCCGCCGT GGTCTCCCCC GCCGCGCTGT CTCTGCTGCT GATCTCCTTC
CCGGACAACA CCGACGCCGA GAAGGCCCAG CGCAACAAGG CGCTGGGCGT GTGGGGCGCG
GTCGCCGGAG CCGGCGGCGC CGTCGGTCTG ATCCTGGGCG GCATGCTGAC CGACTGGTTC
GGCTGGCAGG CCTGCTTCTG GGTCAACGTG CCGATCGGCG TGCTCGCCGC GCTGCTCGCG
CCGCGCATCC TGCCCGAAGG CGCGCCGAGC GGTGAGCGCA ACGGGTTCGA CCTGGCCGGC
GCCTTCACGG TGACCGCGGG TCTGGCCGGA ATCGTGTTCG TCCTGGTCAA CGCGCAGAAG
GTCGGCTGGG GCTCGCCGGA GACGCTGGGT CTGGGCGCCG CCGGGGTGGC GCTGCTGATC
GCCTTCGTGG TGATCGAGGG CCGGACCAAG CAGCCGCTGG TGCCGCTGTC GATCTTCCGG
CGCCCGGTGC TGCGCGGAGC GAACGTCGCC TCGCTGCTGC AGGTCATGGG CCTGATGCCG
GCGTTCTTCT TCATGACCCT GTACACCCAG CAGGTCTTGG GCTACTCGCC GCTGAAGTCG
GGCATGTCCC TGGTGCCCAT CGCGGTGGCG ATCATGGTGG CCGCCACGGC CGCCGGGCAG
CTGGTGGCGA AGGTCGGCAT CAAGCTGACC ACCGTGGGCG GGATGGTCGT GATGGCCGCC
GGACTGCTGT GGGTCAGCGG GATGCCGGCG GACGGCAGCT ACGTCACCGA CCTGCTCCTG
CCGCAGATCG TCATCGGCCT GGGCGGCGGC ATGGCCTGGG TGGCGCTGAC CGTGGCCGGC
ACCGCCGGCG CCTCGGAGGC GGAGTCCGGG CTGGCCTCGG GCCTGCTGAA CACCGCGCAG
CAGATCGGCG GCGCGCTGGG CCTGGCGATC CTGGCCGCGG TGGCCTCGGC CCGCACCTCG
CACCTGTTCG GCACCGGCGA CAACGCCGCG CAGGCGCTCT CCGGCGGCTT CGGCACGGCG
CTGCTGGCCG GCGCGGGGCT GGGCGTGCTG GGCGCGGTGG CGACCGTGTT CCTGCTCCCC
GGCAAGAACG CGATGCCCGC GGTCGACGAG CACGCGATCG AGCTGGCCGA GGAGACCGAC
CACGTCGCGA TCCTGCCGGT GCACGAGGGA CGCGCGCCGG AGACGGTGTC GGCGAACTAG
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| Protein sequence | MSAAAPNAAA APLGGRATIN RSAALALLAV TQFVLVLDAG IVGVALPSLV KGLGFQQADL
SWVTNAYTLM FGGFLLLGGR LADYLGRRRM FMGGLILFSV ASLAGSLSPD PGFLIGARAV
QGFAAAVVSP AALSLLLISF PDNTDAEKAQ RNKALGVWGA VAGAGGAVGL ILGGMLTDWF
GWQACFWVNV PIGVLAALLA PRILPEGAPS GERNGFDLAG AFTVTAGLAG IVFVLVNAQK
VGWGSPETLG LGAAGVALLI AFVVIEGRTK QPLVPLSIFR RPVLRGANVA SLLQVMGLMP
AFFFMTLYTQ QVLGYSPLKS GMSLVPIAVA IMVAATAAGQ LVAKVGIKLT TVGGMVVMAA
GLLWVSGMPA DGSYVTDLLL PQIVIGLGGG MAWVALTVAG TAGASEAESG LASGLLNTAQ
QIGGALGLAI LAAVASARTS HLFGTGDNAA QALSGGFGTA LLAGAGLGVL GAVATVFLLP
GKNAMPAVDE HAIELAEETD HVAILPVHEG RAPETVSAN
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