| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4698 |
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| Symbol | |
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| ID | 8336052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5355210 |
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| End bp | 5355986 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644957798 |
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| Product | transcriptional regulator, DeoR family |
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| Protein accession | YP_003115400 |
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| Protein GI | 256393836 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00604276 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCGCT CCGACCGCGT CACCGCGATC CTGGACCGGC TGGCCTACGG CGGCACCGTG
GACGTCACGA CCGCCGCCCG CGAACTCGGC GTCTCCGTGG CGACCATCCG CCGCGACCTG
ACCCTCCTGG ACGACCAGAA CCTGCTGGTC CGCACCCGGG GCGGCGCGGT CGGCCGCGAC
GTCGCCTACG AGCTGCCGGT CCGCTACCGC GACAACCACG GCCGCGCCGC CAAGCAGGCG
ATCGCGCGCA TGGCCCTGCG CGCCCTGGCG CCGGGCCGCC ACGTCGTGGC CGTCAACGGC
GGCACGACGA CCAGCGAGGT GGCCCGCCTG CTGGCCACCC GCACCGAGCT GACGGTGGTC
ACCAACGCGC TGAACATCGC CGGCATCCTG GTCAACCGCC CGAAGGTGAA GCTGGTCGTC
ACCGGAGGCG TGGCGCGCTC GAACTCCTAC GAGATGGTCG GGCCCTGGGC CGAGACCATC
GTCGGCCGCT TCAACGTGGA CACCGCCTTC ATCGGCATCG ACGGCATCAG CGCCGCCAGC
GGCCTGTCCA CCCACGACGA GGTCGAGGCG CACACGAACG CGGTGATCAT CGGCCGCGCC
CGGCGCGTCG TGGTGGTCGC CGACGGCTCG AAGATCGGCC GCACGCACCT GGCGCACGTC
GTCGGCCTGG ACGCGATCGA CCAGCTGGTC ACCGACGCCA GCGCCGACCC GGCGGAGCTG
CAGGCGATCG CGGCTCAGGG GGTTGCGGTG CGGATCGCGG AGCCGGTGCG GCGGTGA
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| Protein sequence | MHRSDRVTAI LDRLAYGGTV DVTTAARELG VSVATIRRDL TLLDDQNLLV RTRGGAVGRD
VAYELPVRYR DNHGRAAKQA IARMALRALA PGRHVVAVNG GTTTSEVARL LATRTELTVV
TNALNIAGIL VNRPKVKLVV TGGVARSNSY EMVGPWAETI VGRFNVDTAF IGIDGISAAS
GLSTHDEVEA HTNAVIIGRA RRVVVVADGS KIGRTHLAHV VGLDAIDQLV TDASADPAEL
QAIAAQGVAV RIAEPVRR
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