Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4687 |
Symbol | |
ID | 8336041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5340810 |
End bp | 5341985 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644957787 |
Product | ROK family protein |
Protein accession | YP_003115389 |
Protein GI | 256393825 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.70275 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAGC TGAGTGTCAA CGGCGCCGAC GCCGTGCTGC TGCGCCGGCT GCGGCTGCTG TCGGTCGTGG ACGCGCTGCG CCGGACCGGG CCGCAGCCGC TCACCGCGCT GGCCCGGCAG ACCGGGCTGT CGCGGCCGAT CGTGCAGACG CTGGCCGACG AGCTCACCGA GATCGGCTGG GTCGCCGCGG TGGCGCCGGC CGAGCCGAAC GGCGTCGGAC GCCCGGCGCG CGCCTTCCGC TTCCGGGCCG AAGCCGGCAG CGTCGCAGGG CTCGACATCG GCGCCCACGC GATCACCGCG CTGGTCGCCG ACCTGGACGG CGAGGTGCGC GGCCGCAGCC GGATCACGGT GAGCCCGTCC ACCCCCGCCG CCGAACGGCT CGCCTCGGCG AAGGCGACCC TGACCGAGGC GTGCACTGCC GCTGGACTGG AACCGGCTCG GCTCAGCCAG CTCGGTGTGG CCAGTACCGG CGTCATCGAG CACTCCGGAC GCGTCGCGTT GTCGGTCGCG CTGCCCGGCT GGACCGGCAT CGACATCCCC GCCGCCTTCG CCGACACCGT CCGCTGCCCG GTCGTCGCCG AGAACGACGG CCGCGCCGCG GCGCTGGCCG AACGCTGGCG CGGCGCCGGC CGCGACGTCG AGGACATGGT CTACATCCAC GCCGGCTTCC GCACCGGCAA CGGCGTCTTC GTCGGCGGAC GCCTGCTGCG CGGGCACACC GGCGCCGCCG GCGAGATCGG CGCCCTGCCC TCCTCCGGCT GGGCCGAGGC GCCGACCCAC CTGCTGGGCT TCTCAGGCCT GGACGAAGAG GTCCGCCTGG AGCAGACGGC GGAATTCGTC TTCTCCCGGG CCCGCGCCGG CGACCCGACC GCCCTGGTGG CGACCGAGCG CTTCGTCCGC GCCCTGGCCG GCGGCATCGC GGCCCTGGTC CTCACCTTCG ACCCGGAGCT GGTGGTCTTC GGCGGCGGCA TCTCCCGCTC GGCCGACCTG GTCCTGGACC GCCTCACCGC CGAGCTGGAA CGGGACTGCA TCCGGGTCCC GCCGGTCGTC GCCTCCAGCC TGGACGCCGA GTGGGTGGTG CTCGGCGCGG TGCGCGTCGC CCTCGACGCG ATCGAGGCGC GCTACTTCGC GACGGGGATC TCCGAGCCGC TGGCGCCGCC GCCGATCGCG GCGTGA
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Protein sequence | MTELSVNGAD AVLLRRLRLL SVVDALRRTG PQPLTALARQ TGLSRPIVQT LADELTEIGW VAAVAPAEPN GVGRPARAFR FRAEAGSVAG LDIGAHAITA LVADLDGEVR GRSRITVSPS TPAAERLASA KATLTEACTA AGLEPARLSQ LGVASTGVIE HSGRVALSVA LPGWTGIDIP AAFADTVRCP VVAENDGRAA ALAERWRGAG RDVEDMVYIH AGFRTGNGVF VGGRLLRGHT GAAGEIGALP SSGWAEAPTH LLGFSGLDEE VRLEQTAEFV FSRARAGDPT ALVATERFVR ALAGGIAALV LTFDPELVVF GGGISRSADL VLDRLTAELE RDCIRVPPVV ASSLDAEWVV LGAVRVALDA IEARYFATGI SEPLAPPPIA A
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