| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4677 |
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| Symbol | |
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| ID | 8336031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5326841 |
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| End bp | 5329315 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644957777 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003115379 |
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| Protein GI | 256393815 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0104486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCA TCGAAGCGCT TCGATTCCGC TCCGCCCCGC TGAAGGACGA TCCCGTGACC
CAGGCCTCCT CCGATCCCGG CTCCCGCCCT CTCCCCGGTC CCCTCCCCCG CCCCGGCCAC
CGTGATGCCG CCGACATCCT GGCCCGGCTG ACCCTGGCGG AGAAGATCGC GATGCTGCAC
CAGCACCAGC CGGCCGTCCC CCGGCTCGGG CTCGCGGCGT TCACCACCGG CTGCGAGGCG
CTGCACGGCG TGGGCTGGAT CGGGCGCGCG ACGGTGTTCC CGCAGGCCGT CGGGCTCGGG
GCGACGTGGG ATCGGGAGCT GCTGCGGCGG GTCGGGCAGG CGGTGTCGAG CGAGGTGCGC
GCGTTCCGTC AGGACACTGC GAAGGCGATG GCGAAGAACG AGGTCGCCGA GAAGTTCCCG
ATGGTGTCGC TGAACGTCTG GGCGCCGGTG GTGAACCTGC TGCGCGATCC GCGCTGGGGA
CGCAACGAGG AGGGGTACAG CGAGGACCCG TACGCCACCG GCGAGATGGC GATCGCCTAC
TGCCGCGGAC TGCGCGGCGA CGACCCGCGC GTGTGGCGCA CCGCTCCCCT GCTGAAGCAC
TTCCTCGCCT ACAACGCCGA GACCGACCGC GACATCGCCA GCGCCACGGT GCCCGAGCGG
GTGCTGCACG AGTACGAGCT GCCGGCGTTC CGGCGGCCGA TCGAGGACGG CGCGGTCGCG
GGCGTGATGC CCGGATACAA CCTGGTCAAC GGGATCCCGA ACCATGTCCA CCCGCTGATC
GGCTCCGCGT TGCGCGCGTG GGACGCGGAG CTGGCGGTGT GCTCGGACGC GCAGGCGCCG
TCGAACCTGG TTGAGCGGGA GAAGTACTTC GATACGCACG TCGAGTCGCA CGCCGCCGCG
CTGCTGGCGG GGATCGACAG CTTCACGGAC AACTCGCAGG ACAGCGCGCC GACGATCGAG
CGGTTCACTG AAGCTTTCAC GCGCGGGTTG GTGTCCGAGG CGGATATCGA CGCGGCGGTG
GGGCGGGTGC TGCTGATGCG GCAGCGGACC GGGGAGTTCG ATCCGGAGGG TGATCCGTAC
GCGGGGATCC GGGCGGAGGT GATCGCCTCC GCTGAGCACG CGGCGCTGGC TTTGGAGGCG
GCGCGGGCGG GGGTGGTGCT GCTGCGGAAC GAGGGGGGTG CGCCGCCGCT GGCTGAGTTC
TCGGGGGCGA TCGCGGTCGT CGGGCATCTC GGGTCGCGGG TGCTGACCGA CTGGTATAGC
GGGACGCTGC CTTACGCGGT CTCCATTGCC GAAGGGCTGG GGGCGGCTGC CGCGGTTGAC
GGGTCGGACA CGGTGCTGCT GCGGTCGGCG GGTGGGGAGG GCGGCGAGTT CGGGCCGTTC
AAGCACGTCG ACTGGGGTAC GAGCGTGCAG TGCCCGCAGG CTGTCCACAC TTTCCAGTCT
GTTGATTCAG GCCTGTACCT GACTGTCGGC GACGACTCGG TGGTGGACGC GGCTGCGGCT
ACGCCGGACG GCTGGGTCGT GCGGGAGCTG TTCGAGCTCG AGCATGTCGC GGGCGGTGTC
GCGGTGCGGT CCAACGCGAC CGGTCGGTAC GTGCGCGTCG GCGCCGACGG CGTGTTGATC
GCCGACTCGG ACACACCCGA GGAGATCTTC ACGCTCCAGG TACTCACCTC AGGCCTCGAC
GAAGCCGCCC GCGCGGCGGC GAGCGCCGAG CGAGTGGTCC TGGTCGTCGG CAACGACCCG
CACATCAACG GCCGCGAGAC CATCGACCGC GACAGCCTCG CGCTGCCGCC GCACCAGGAG
GCCCTACTGG CCGCGGTCCA CGCGGCGAAC CCGGCCACGA CACTGGTGAT CGTCTCCAGC
TACCCCTACG CGATCGACAC ACAGATCCCC ACGATCCTGT GGACCTCCCA CGCCGGCCAG
GAACTCGGCA CCGCCATCGC CGACATCCTC ACCGGCGCCC ACAACCCCTC CGCCCGCCTC
CCCCAGACCT GGTACGCGAG CGCCGACGGC CTGCCCGACC CGTACGACTA CGACATCATC
GGCTCGGAGT GGACATACCA GTACTCCCGC CGCGACCACC TGTGGGCATT CGGCCACGGC
CTCTCCTACA CGGACTTCGA GTACTCAGAC CTGACGCTCA CGCGCTCCGA CTCGGACTCG
GACTCGGACT CGGACTCGAC GCTCACGGCA ACGCTGGAGG TCACCAACAC CGGCACACGC
GACGGAGCCG AAATCGTCCA GCTCTACACC CGCTCCCTCG ACGGCGACCG CCGCCCCCTC
CGCAAGCTCG CAGCCTTCAC CAAGCTGCAC CTACCAGCAG GCGAAAGCCA GACGGTCACC
TTCGACGTGC CACTGACCGA GCTGGCCTTC TGGGACGAGG CAGCGCAGCA CTTCGCCATC
GACAAGGGCC GCTACGAGGT CCTCGTCGGC GCCTCGTCAC AGGACATTCG GACGCGACAG
GAGTTCTCGG CGTAA
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| Protein sequence | METIEALRFR SAPLKDDPVT QASSDPGSRP LPGPLPRPGH RDAADILARL TLAEKIAMLH
QHQPAVPRLG LAAFTTGCEA LHGVGWIGRA TVFPQAVGLG ATWDRELLRR VGQAVSSEVR
AFRQDTAKAM AKNEVAEKFP MVSLNVWAPV VNLLRDPRWG RNEEGYSEDP YATGEMAIAY
CRGLRGDDPR VWRTAPLLKH FLAYNAETDR DIASATVPER VLHEYELPAF RRPIEDGAVA
GVMPGYNLVN GIPNHVHPLI GSALRAWDAE LAVCSDAQAP SNLVEREKYF DTHVESHAAA
LLAGIDSFTD NSQDSAPTIE RFTEAFTRGL VSEADIDAAV GRVLLMRQRT GEFDPEGDPY
AGIRAEVIAS AEHAALALEA ARAGVVLLRN EGGAPPLAEF SGAIAVVGHL GSRVLTDWYS
GTLPYAVSIA EGLGAAAAVD GSDTVLLRSA GGEGGEFGPF KHVDWGTSVQ CPQAVHTFQS
VDSGLYLTVG DDSVVDAAAA TPDGWVVREL FELEHVAGGV AVRSNATGRY VRVGADGVLI
ADSDTPEEIF TLQVLTSGLD EAARAAASAE RVVLVVGNDP HINGRETIDR DSLALPPHQE
ALLAAVHAAN PATTLVIVSS YPYAIDTQIP TILWTSHAGQ ELGTAIADIL TGAHNPSARL
PQTWYASADG LPDPYDYDII GSEWTYQYSR RDHLWAFGHG LSYTDFEYSD LTLTRSDSDS
DSDSDSTLTA TLEVTNTGTR DGAEIVQLYT RSLDGDRRPL RKLAAFTKLH LPAGESQTVT
FDVPLTELAF WDEAAQHFAI DKGRYEVLVG ASSQDIRTRQ EFSA
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