| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4594 |
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| Symbol | |
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| ID | 8335948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5226068 |
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| End bp | 5226916 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644957695 |
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| Product | Linocin_M18 bacteriocin protein |
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| Protein accession | YP_003115297 |
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| Protein GI | 256393733 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1659] Uncharacterized protein, linocin/CFP29 homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0142366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00338806 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAACT TGCACCGCGA CCTAGCCCCG GTCAGCGACG CCGCTTGGGA GCAGATCGAG
GAGGAGGCGC GCCGCACGGT GCTGCGGTAC CTGGCCTTCA GGCGCGTCGT GGACGTCGCG
GGCCCGGCGG GCTTGGAGCT CGGCGCGGTC GGGGACGGCC ACACCTCGGC CATCGCCGCT
CCGCACGACG GCGTCCACGC GCGTCTGCGC AGCGCCCAGC CGCTGGTGGA GGTGCGCATC
CCCTTCGAGC TGGACCGCAC GGGCATCGAC GACGTGGAGC GCGGCGCCCA GGACAGCGAC
TGGCAGCCGG TGAAGGACGC GGCGAAGATC GCGGCGTTCA CCGAGGACCG CGCGATCGCC
GACGGCTACG CGGCCGCCGG CATCACCGGC CTGCGCCCCT TCGCCAGCAA CGCGGCGATG
CTCCAGCCCG AGGACCCGGC CGACTACCCG ACCACCGTGG CGCGGATGGC CACGCAGCTG
AAGCTGGCCG GCGTCGAAGG GCCCTACCAC CTGGTGCTCG GCGCCGACGC CTACCAGGCG
CTCTCGGACG CGGTGGACCA CGGCTACCCG GTCGCCGAGC ACGTCGCGCG CCTGATCGAC
GGCGACGTGA TCTGGGCGCC GGCGATCACC GGCGGCGTGC TGCTGTCCGG CCGCGGCGGC
GACTACCAGC TGCAGCTGGG ACAGGACCTG TCGATCGGGT ACGAGTCGCA CACGGCGGAG
AAGGTGCGGC TGTACTTCAC GCAGTCGTTC ACGTTCCTGC CGTACACCGC CGAGGCCGCG
GTGCCGCTGA GCGGGATGGG CAAGGACGCC AGCGCCAAGG ACGGCAAGCT GGGCAGGCGG
TCGCGATGA
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| Protein sequence | MNNLHRDLAP VSDAAWEQIE EEARRTVLRY LAFRRVVDVA GPAGLELGAV GDGHTSAIAA
PHDGVHARLR SAQPLVEVRI PFELDRTGID DVERGAQDSD WQPVKDAAKI AAFTEDRAIA
DGYAAAGITG LRPFASNAAM LQPEDPADYP TTVARMATQL KLAGVEGPYH LVLGADAYQA
LSDAVDHGYP VAEHVARLID GDVIWAPAIT GGVLLSGRGG DYQLQLGQDL SIGYESHTAE
KVRLYFTQSF TFLPYTAEAA VPLSGMGKDA SAKDGKLGRR SR
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