| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4585 |
|---|
| Symbol | |
|---|
| ID | 8335939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 5216777 |
|---|
| End bp | 5217472 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644957686 |
|---|
| Product | ThiJ/PfpI domain protein |
|---|
| Protein accession | YP_003115288 |
|---|
| Protein GI | 256393724 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.034255 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAC AGCCTCCCGC CGCCGACCGT CCCCGGGTCC TGTTCATCGT CAGCGCCGCG
CACCAGCTGA CCATGAAGGA CGCCACCCTT CTCACCACCG GCTTCTGGGC CGAGGAACTT
CTCGTGCCGC ACCAGGCGTT CACGCAGGCC GGCTTCGACG TCAAGTTCGC CACCCCGGCC
GGCCTGGTCC CGCAGCCCGA CCCGCGAAGC CTGAACGCCC ACGACGGCGC CGAGCTGGAC
CACCTCCCGG ACCTGCGCAC CCCGCTGGTC CTGGACGACG TCGAACTCGA CGGCTACGAA
GCCCTCTTCG TCCCCGGCGG CCACGCACCC CTCGAGGACC TGGCCACCGA CCGCGTCGCC
GGGACCCTCA TCACCGACGC CCTCACAGCC GGCAAACCAG TCGGCGCAGT CTGCCACGGT
CCAGCCGCCT TCCTCGCCGC CCACCGCCCC GATGGCACCC CCGCCATCGC CGGCTACCGC
ATCACCGCCT TCACCGACGA AGAGGAACGC CAAGGCGGCC TCGCGGACAA CATGCGCTAC
CTCCTGGAGG ACAAGCTCGT CGAGCTCGGC GCCGACTTCG TCCAAGGCCC GGCGTTCCAC
GAGCACACCG AGACCGACCG GAATCTGCAC ACCGGGCAGA ATCCGCAGTC GTCGGCGCAG
ATCGCCGCGG ACATGCTGGA GGCTTTGGGG CGGTAG
|
|---|
| Protein sequence | MSEQPPAADR PRVLFIVSAA HQLTMKDATL LTTGFWAEEL LVPHQAFTQA GFDVKFATPA
GLVPQPDPRS LNAHDGAELD HLPDLRTPLV LDDVELDGYE ALFVPGGHAP LEDLATDRVA
GTLITDALTA GKPVGAVCHG PAAFLAAHRP DGTPAIAGYR ITAFTDEEER QGGLADNMRY
LLEDKLVELG ADFVQGPAFH EHTETDRNLH TGQNPQSSAQ IAADMLEALG R
|
|---|
| |