Gene Caci_4576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4576 
Symbol 
ID8335930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5208355 
End bp5208846 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content72% 
IMG OID644957677 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003115279 
Protein GI256393715 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0649129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.528305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCG CTGCCGCCCC CGCCGACGTC CCGACCATCC GCGCCCTGGT CGCCGCCCTC 
GCCGAGTACG AGCGCGAGCC GGAATCGGCC AAGGCCACCG AGGAGCAGTT CCACGCCGCC
CTGTTCGCCG AGCACCCCGC CGTCTTCGCC CTGATCGCGG AGGACGACGC CGGCACCCCG
GTCGGCTTCG CGCTGTATTT CCTGAACTTC TCCACCTGGA ACGGCACGCA CGGCATCTAC
CTGGAGGACC TGTTCGTCCT GCCCGAGGCG CGCGGCGGCG GCTACGGCAG CGCGCTGCTG
CGCGAGCTGG CCCGCATCGC CGTCGAGCGC GGCTACAGCC GCGTGGAGTG GAGCGTGCTG
GACTGGAACG AGCCGTCGAT CGGCTTCTAC AAGGCGCTCG GCGCGGTCGC GATGGAGGAG
TGGACCACGA TGCGGCTGAC CGGCGACGCG CTGCACGCGT TCGGCGGCGC GGCGGCCCGG
CAGGACACTT AG
 
Protein sequence
MIRAAAPADV PTIRALVAAL AEYEREPESA KATEEQFHAA LFAEHPAVFA LIAEDDAGTP 
VGFALYFLNF STWNGTHGIY LEDLFVLPEA RGGGYGSALL RELARIAVER GYSRVEWSVL
DWNEPSIGFY KALGAVAMEE WTTMRLTGDA LHAFGGAAAR QDT