Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4456 |
Symbol | |
ID | 8335810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5071317 |
End bp | 5072549 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644957558 |
Product | histidine kinase |
Protein accession | YP_003115160 |
Protein GI | 256393596 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCC GTGCCCGGTT CGCCCGGAGC CTGCGCTCGA CCTGGTACCT GGTCGCCGGG CTGCGCACGG CGCTGCCCGC GCTGCTCGGC GTCTGCCTGC TGCCGCTGGC GCTGCTGCTG GCGTTCGGCG TGCCGGGGCT GCCGTGGGTC GCCGGGCGGA TCCGGGCCCT GACCAACGTC GAGCGGCGCC GCGCGGCGAA GGTCCTGGGG CAGCCGATCC TGGAGCCGGC GACGCCGCAG GCGATCAATC CGTATCAGCA GTATTTCTCG CTGATGCGCT CCACGGCGGT GTGGCGGGAC ATCGGCTGGA TGTTCGTGCA CGGCTTCGTC GGGCTGATCG TCACCGTGTT CTCGGTGGAG ATGTGGCTGA CGATCCCGTG GAACCTGGCG CTGCCGTTCT GGTGGTGGAC ACAGCCGCCG GGCACGCTCG GCGCCATCTT GCAGATCTAC ACCTGGCCGC AGGCGATCGC CTACCCGGTG GGGTCGGCGG CGTTGTTCAT CGTGATCCAG CTGTTCTTGC AGCCGTGGCT GGCCCGCTTC GAGGGCTGGT ACGCCCAGCG CCTGCTCGGC CCGACCCGCC GGACCGAGCT CGCCGCCCGC GTGGAGTCGC TGACCGAGAC CCGCGCCGAG GCCCTGGAGG CGCACGGCGC AGAGCTGCGC CGCATCGAGC GCGACCTGCA CGACGGCACC CAGGCCCAGC TGGTCAGCGC CGCGCTCCGG CTGGGCCTGG CCGACCAGCG GTTCGACGCC GACCCCGGCG GTGCCAGGAA GCTGATGCTG GACGCGCGCA CCGGCATCGA GGACGCGCTG GCCGAGCTGC GCGACGTGAT CCGCGGCATC CATCCGCCGA TCCTGAGCGA CCGCGGGCTG GCCGGGGCGG TGCGCGCGCT GGCCGCCGGA CGCCCGGTCC CGGTGTCGGT GGAGATCCCG GAGCCGGACC GGCGCTGCCC GGCGGCGGTG GAGGCGGCGG CGTACTTCGT GGTCGCCGAG GCGCTGACCA ACGTCGCCAA GCACAGCGGC GCGGCGCACG CCTGGGTCTC GGTCCGGCAT GATGGCCCGT ATCTGACGGT GCGCGTCCGC GACGACGGCC GCGGCGGCGC GGACCCCGCA GGGGGCAGCG GCCTGGCCGG CATCCGCCGC CGGGTCGCGG CGCTGGACGG CGTCACCCGT ATCGACAGCC GCACCGACGG GACCGGCACG ACCGTGGAAG TGGAGCTGCC GTGCGGCTTG TGA
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Protein sequence | MKIRARFARS LRSTWYLVAG LRTALPALLG VCLLPLALLL AFGVPGLPWV AGRIRALTNV ERRRAAKVLG QPILEPATPQ AINPYQQYFS LMRSTAVWRD IGWMFVHGFV GLIVTVFSVE MWLTIPWNLA LPFWWWTQPP GTLGAILQIY TWPQAIAYPV GSAALFIVIQ LFLQPWLARF EGWYAQRLLG PTRRTELAAR VESLTETRAE ALEAHGAELR RIERDLHDGT QAQLVSAALR LGLADQRFDA DPGGARKLML DARTGIEDAL AELRDVIRGI HPPILSDRGL AGAVRALAAG RPVPVSVEIP EPDRRCPAAV EAAAYFVVAE ALTNVAKHSG AAHAWVSVRH DGPYLTVRVR DDGRGGADPA GGSGLAGIRR RVAALDGVTR IDSRTDGTGT TVEVELPCGL
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