Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4409 |
Symbol | |
ID | 8335763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5004574 |
End bp | 5005590 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644957512 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003115114 |
Protein GI | 256393550 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.408159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCAGC AGGGCCGCCG GCGGCACGTC AGCATCACCG ACGTCGCCGC TCAGGCGGGG GTCAGCATCA CGACGGTCTC GCACATGCTG TCCGGCCAGC GGCCGGTGGC GGCGGCGACC GCGGCGAGGG TCCAGCAGGT GATCGCCGAT CTCGGCTACG AGCCCAACCG CCTGGCCCGC GGCCTGCGCC TGCAACGCAC GGACACCGTG GCGCTGGTGA TCCCGGACAT CACCAACCCC TTCTACCCGC TGATCGCCCG CGGCCTGCAG AACGTCCTGG GCCCGGCGGG CCTCCAGGTC TTGGTCACCA GCACCGACGC CGACCCGGCC GCCGAGGAGG CGGCGGTGCA GCAGATGATC ACCCGCCGCG TCGACGGTCT CGCCTTCGCC GACTACCAAG CCGACCACCG CCGCGTCGCC GCCGCAGCCG AGGTCGGCAT CCCGGTGGTC CTGCTGGGCG GTCGCACCAC GCGCCCCGGC ATCGACGTGG TCAGCTCCGA CGACGTCGCC GGCGGCACGA TCGCGGCCGA ATACCTGATC GGCCGCGGCT ACCAGCGCAT CGCGTTCATC ACCGGCGCCG AACGCGTGGG CTCCCCGGCC AACCGCGTGC TGGGCTACCG GCACGCGCTG CGCGAGGCGG GCAGGCCGTA CGCACCGTCG CTGGTGGTCC GCGAAGAGAT CAGCCGCGAC GGCGGAGCCC GCGCGATGCA GCGGCTGCTC ACGCTGCGGC AGACGCCGGA CGCGGTCCTG TGCACCAACG ACGTAGTGGC GCTCGGTGCG CTGGACACGG CGAAGGCGCG CGGGCTGCGC GTGCCGGAGG ACGTGGCGGT GATGGGCTTC GATGACATCG ACATCGCGGC GCTCACCACG CCGACGCTGA CCACGGTGTC GAACCGGCCC AGGGAGCAGG GCGAGGCAAT CGGGCGCCTG TTGCTCGGAC GGCTGAACGG ATCAGCGCCG CGCGGCCCGC AGCGGATTCT GTTCGATCCG GCGGTGGTGC AGCGGGATTC GGCTTAA
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Protein sequence | MAQQGRRRHV SITDVAAQAG VSITTVSHML SGQRPVAAAT AARVQQVIAD LGYEPNRLAR GLRLQRTDTV ALVIPDITNP FYPLIARGLQ NVLGPAGLQV LVTSTDADPA AEEAAVQQMI TRRVDGLAFA DYQADHRRVA AAAEVGIPVV LLGGRTTRPG IDVVSSDDVA GGTIAAEYLI GRGYQRIAFI TGAERVGSPA NRVLGYRHAL REAGRPYAPS LVVREEISRD GGARAMQRLL TLRQTPDAVL CTNDVVALGA LDTAKARGLR VPEDVAVMGF DDIDIAALTT PTLTTVSNRP REQGEAIGRL LLGRLNGSAP RGPQRILFDP AVVQRDSA
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