| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4381 |
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| Symbol | |
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| ID | 8335735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4971303 |
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| End bp | 4972733 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644957484 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003115086 |
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| Protein GI | 256393522 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.603539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.495238 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGGGTTG ACCTGAACCC GGTGACGGCG GACGTCGAAC CGGGTGCCGA GACCACGGTG
ACCATCACCG TGCGCAACAC CGGCGACATC GTCGAGGAGT ACCACCTGCA GGCGACCGGC
GACCCCGGGC AGTGGGGAAG CATCGAGCCG CAGACGCTGC GCCTGTATCC CGGCACGACC
GGCACCGCGC AGCTGACGTT CACGCCGCCG CGCAGCGCCG AGGCCCAGGC GGGCCCGCAG
CCGTACGCGG TGAAGGTGAC GCCGCGCGAG AGCCGCGAGA ACACCTTCGC CATCGAAGGC
GTGCTGCGTA TCGCAGAGTT CGCCGATCTG CGCGCCGAGC TCCTGCCGTC CACCACGCGC
GGCTGGCATC GCGGCAAGGT CCGCCTCGCC GTCGACAACT ACAGCAACGT CGTCACGAGC
GCAGCGGTGT CGACCACCTC GACCAACTCC AACCTGCAAG TGGACATCCG CACCGCAGCG
CTGCGATTGC AGCCGGGACG CGCGCAGTTC AGCAAATTCA GCGTCCGCCC GGGGCGGTTG
CTGTGGTTCG GCGTCAAGGC AAAGCACCAA TACAACGTCA CCGTCACCCC CTCAGGACTG
GGGCAGCCGG TCAGCCTTCA GGGCACCTAC CTGCAATCGG CACTGCTTCC CCGCTGGCTC
CAGCGGCTGC TGATGTTCTT CGCAGCCGCC GCGGCGGCGA TCCTCGCGCT GTGGTTCGGG
ATCCATCCGT CCTTCGCCAC CAGCGCGCAG GCCTCGCCGC AGCCGGCCGC CGCGACCGCG
CCGACGGTCA TCGTCATCCA GCCGACGCCG GCGGCGCCTT CCAGCACCCC GTCGCCGAAG
CCGACGACGA GTTCGGCCGC GCCGCCGCCC CCGCCGAGCA GTTCCAAGTC CGTCGCCCCG
CCGCCGGCCT CCACGTCCAA GGCCGCCGCT CCGCCGCCGT CGAAGACCCC GGCGCCTCCG
CAGCCGCCGA CCCAGCGCAA GACGACCAAC ATCCTGAACT ACTCGGCCAA CGCCTCGGTC
GACCTGAACA TGGACAAGTT CAACGACGGC CAGCAGGTGG ACATCTGGCC CACCAACCAC
TCCAACGCCC AGACCTGGAC CGTCTGGAGC TACTCGGACG GCACGATGGT CATCCAGTCC
AACGACAAGC CCGAGAGCGC CGGCACGAAG GTCCTTCAGG TGGACGAGCA CAATTCCGCC
GACGTCGACA TCTCGGATGA CTGGAACGGG GTAGCCGGTC TGAAGGCGCA TCTGACCGCG
CCGTTCCAGG TCTGGACCTT CACCAGCATC CCCGGCCACG CGAACTACGG CGTGCTGAAG
AACCAGCAGA GCGGGACCTG TCTGGCGAGC AAGGGCTCCG CGCAGTGGCT CACGACGGTG
CCCTGTAACA CCGGGGACCA GACGCAGTGG TTCTGGCTGT TCGCGGTGTG A
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| Protein sequence | MWVDLNPVTA DVEPGAETTV TITVRNTGDI VEEYHLQATG DPGQWGSIEP QTLRLYPGTT
GTAQLTFTPP RSAEAQAGPQ PYAVKVTPRE SRENTFAIEG VLRIAEFADL RAELLPSTTR
GWHRGKVRLA VDNYSNVVTS AAVSTTSTNS NLQVDIRTAA LRLQPGRAQF SKFSVRPGRL
LWFGVKAKHQ YNVTVTPSGL GQPVSLQGTY LQSALLPRWL QRLLMFFAAA AAAILALWFG
IHPSFATSAQ ASPQPAAATA PTVIVIQPTP AAPSSTPSPK PTTSSAAPPP PPSSSKSVAP
PPASTSKAAA PPPSKTPAPP QPPTQRKTTN ILNYSANASV DLNMDKFNDG QQVDIWPTNH
SNAQTWTVWS YSDGTMVIQS NDKPESAGTK VLQVDEHNSA DVDISDDWNG VAGLKAHLTA
PFQVWTFTSI PGHANYGVLK NQQSGTCLAS KGSAQWLTTV PCNTGDQTQW FWLFAV
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