Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4378 |
Symbol | |
ID | 8335732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4967228 |
End bp | 4967830 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644957481 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003115083 |
Protein GI | 256393519 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.136582 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAGC AGGATCGGAC GAGGGTGCCG CGCGGCGAGG CCAGGGACCG GATCGTCGCC GCGGCCACGG AGCTGTTCGG CCGCCAGGGC TACGAGGCCA CGACCACTCG CCAGATCGTC GAGGCCGCAC AGGTCACCAA GGGCGCGCTG TACCACTGGT TCAGCTCCAA GGAGGAACTG CTCACCAGCA TCTACCGCGA ACTGCTCGCT GAACAGACTT CACGCCTGAA GACCATCGCC GCCGCCGACA CCCCCGCCGA CGCCCGCCTG CACCTAGCCG TCACCGACCT CTTCGCGCAC ATGGACGACC ACGCCGAACC CCTGACCGTC TGGGCCCGCT CCATGCACCT CGTAGCCGGC GAACACGCCG CCGCCGTCCG CGCCGAACGC CGCCGCTACC AACACCTCTT CCAGGACCTG ATCGAGGAAG GACAGAAAGC CGGCGTGTTC CGCGCCGACG TAGCCGCCAG CGTCATCACG AACACATTCC TGAGCAGCGT GGTCCAGATC CACCGCTGGT TCCGCCCCGA CGGCCCACTG ACGCGCCGAG AGCTGGGCAC GCAGATGGTG GCTCTGTTCC TGGACGGGGT GCGCGTCGGG TAG
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Protein sequence | MAEQDRTRVP RGEARDRIVA AATELFGRQG YEATTTRQIV EAAQVTKGAL YHWFSSKEEL LTSIYRELLA EQTSRLKTIA AADTPADARL HLAVTDLFAH MDDHAEPLTV WARSMHLVAG EHAAAVRAER RRYQHLFQDL IEEGQKAGVF RADVAASVIT NTFLSSVVQI HRWFRPDGPL TRRELGTQMV ALFLDGVRVG
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