Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4362 |
Symbol | |
ID | 8335716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4949831 |
End bp | 4950655 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644957465 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003115067 |
Protein GI | 256393503 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.236839 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0715195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACAG AGCGAAACAC GAAGACATGG TTCATCACCG GCGCGTCCCG CGGCTTCGGC CGGATCTGGG CTGAGGCAGC CCTTTCCCGC GGCGATCGTG TCGCGGCGAC GGCGCGCCGT CCGGAGTCCC TGCAACCGCT TGTCGACGTC TACGGCGACG CCGTCCTCCC GCTGGTGCTC GACGTCACCG ATCGCGCCGC CGCCTTCGCC GCGGTCGCCC GGGCCGCCGA GACCTTCGGT CGCCTCGACG TCGTGGTCAA CAACGCCGGC TACGGGCTGT TCGGCATCGT CGAGGAGGTC ACCGAGGAAC AGGCTCGCGC GCAGCTCGAC ACCAACCTGC TCGGTCCGCT GTGGGTGACG CAGGCCGCGC TGCCGTATCT GCGCGAGCAG GGCAGCGGCC ACATCCTGCA AGTGTCCAGC CTCGGCGGGC TCGCCGGCTT CCCGACGCTG GGTCTGTACA ACGCCTCCAA GTGGGGTCTG GAGGGCATGA GCGAGGCGCT GGCTCAGGAA GTCGGCCCGC TCGGCATCCA CGTCACGATC GTCGAACCCG GTCCGTACGG CACCGACTGG TCCGGCGGCT CAGCAGTGCA CGCCGAGCCG ATGGCGGCGT ACGAGCCGAT CCGCGAAGCC CGTCGCGCCG GCGCCACCAC CCGCGCGCCG CAGGACCCTG CGATGACCGC CGAGGTCATC CTGGAACTGG TCGACACCGA GGAACCGCCT CTTCGGCTGT TCCTCGGCGC CTACCCCTAT CCCGTCGTCG AGGCCGCGTA TCGCAAGCGG TTGGAGACCT GGGAGGCCTG GCGTCCGCTG GCCACCAAGG CTTGA
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Protein sequence | MNTERNTKTW FITGASRGFG RIWAEAALSR GDRVAATARR PESLQPLVDV YGDAVLPLVL DVTDRAAAFA AVARAAETFG RLDVVVNNAG YGLFGIVEEV TEEQARAQLD TNLLGPLWVT QAALPYLREQ GSGHILQVSS LGGLAGFPTL GLYNASKWGL EGMSEALAQE VGPLGIHVTI VEPGPYGTDW SGGSAVHAEP MAAYEPIREA RRAGATTRAP QDPAMTAEVI LELVDTEEPP LRLFLGAYPY PVVEAAYRKR LETWEAWRPL ATKA
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