Gene Caci_4326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4326 
Symbol 
ID8335680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4913436 
End bp4914677 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content71% 
IMG OID644957429 
Productoxidoreductase domain protein 
Protein accessionYP_003115031 
Protein GI256393467 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.247062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGGG ACGGCAGCGG GCTCGTGAGC GGGGACGGCG AGAGCAACAA CGGCAACAGC 
GGCGGATCCT CGACGCTGCG GATCGGCTTG ATCGGGCACG GCTTCATGGG GCGGATGCAC
TCGCTGGCGT GGCAGAGCGT CGGTCGCGCC GTCGAGGTGC CGCTGGTGCC CGAGCTGATC
GCGATCGCCG GACGGAACCC CGGATCGGTC GCGAAGGCGG CGCGCGCCTG GGGGTGGCAG
TCCTGGACCG ACGACTGGCG CACGCTGGTC GCCCGCGACG ACATCGACGT CATCGACATC
ACCACGCCCG GCGCGCTGCA CGCCGAGATC GCGCTGGCGG CGCTGGCCGC GGGCAAGCAC
GTGCTCTGCG AGAAGCCGTT GGCGAACACG CTGGCCGAGG CGCGGGAGAT GACGGCGGCG
GCCGAGGAGG CGGCGGCGCG CGGCGTGCTG TCCATGGTCG GGTTCAACTA CCGGCGCACT
CCGGCGCTCG CGCTGGCGCG GGATCTGGTG GCGCAGGGGC GGCTCGGCGA GATCCGGCAT
GTGCGGGCCG TCTATTTGCA GGACTGGATC AATGATCCGG AGTTCCCGCT GGTCTGGCGG
CTTCGTAAGG AGGAGGCGGG GTCTGGCGCG CTGGGCGATC TCGGCGCGCA TCTGGTGGAT
CTCGCGTACT TCCTGACCGG TCGGCGGATC ACGGGCTTGA GCGCTCGGAC TCGCACCTTC
GTCGAGGAAC GGCCGTTGGC GACGTCCGCT TCGGGACTGA GTGGCGCGGC GGGGAGCGAG
CGCGGCCGGG TGACCGTCGA CGACGCGGCG GTGTTCTTCG CCGACTGCGA GGGCGGGGCG
CTGGCGACGT TCGAGGCCAC GCGGTTCGCC CCGGGGCGCA AGAACGCGAT GCGGATCGAG
GTGAACGGCT CGGAGGGCAG TGTGGCGTTC GATTTCGAGG CGATGAACGA GCTGCAGTTC
TACGACGCGA CCTCGGACGC CGCCGGGGCG GGCTTCTCCC GCATCCTCGC CACCGAGCCG
CAGCACCCCT ATTTGGACGC GTGGTGGCCG CCGGGCCACG GGTTGGGCTA CGACCACACG
TTCGTCAACC AGAAGCGGGA CCTGATCGAG GCGATCGCCG CCGGGAAGGC GCCGACGCCG
TCGTTCGCCG ACGGGCTGTA CGTGCAGGGC GTGCTGGCGG CGGTGGAAGA CAGTGCTCGG
AACAGGTCCG CGTGGACTGC TGTGACCCAG GAGGCGTTGT GA
 
Protein sequence
MSGDGSGLVS GDGESNNGNS GGSSTLRIGL IGHGFMGRMH SLAWQSVGRA VEVPLVPELI 
AIAGRNPGSV AKAARAWGWQ SWTDDWRTLV ARDDIDVIDI TTPGALHAEI ALAALAAGKH
VLCEKPLANT LAEAREMTAA AEEAAARGVL SMVGFNYRRT PALALARDLV AQGRLGEIRH
VRAVYLQDWI NDPEFPLVWR LRKEEAGSGA LGDLGAHLVD LAYFLTGRRI TGLSARTRTF
VEERPLATSA SGLSGAAGSE RGRVTVDDAA VFFADCEGGA LATFEATRFA PGRKNAMRIE
VNGSEGSVAF DFEAMNELQF YDATSDAAGA GFSRILATEP QHPYLDAWWP PGHGLGYDHT
FVNQKRDLIE AIAAGKAPTP SFADGLYVQG VLAAVEDSAR NRSAWTAVTQ EAL