Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4254 |
Symbol | |
ID | 8335608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4829551 |
End bp | 4830678 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644957357 |
Product | peptidase M20 |
Protein accession | YP_003114959 |
Protein GI | 256393395 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.749883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.443673 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATGTCA TGACACTGCC ATCCATGATC GCCGATCTGG AAACGCTCGT GTGCTGCGAA TCCCCGACCG CCGACCGCGC GGCGACCAAG CGCTGCGCGG AGCTCTTCGC CGAGATGGGA GCGCGCCTTC TGGGCTCGGA GCCCGAGTGG TTGGAGCACG GGGGAGCGGC GCAGCTGCGC TGGCGCTTCG GACAAGGCGA CCGCGTCCTG CTGCTCGGCC ACCTGGACAC CGTCTGGCCG CACGGCACGC TCGACCGCCT GCCCTTCGCG CTCGCCGACG GCAAGATCAC CGGACCCGGC TGCTTCGACA TGAAAGTCGG ACTCGTGCAG ATGCTGCACG CGCTCGCCGC TCTGCAAGCA TCCAGCCCCG ATGCGGTGGA CACGTTGGAC GGCGTCACCA TCCTGGTCAC CACCGACGAA GAAGTCGGCT CCCCGGCAGC CCGCGCCCTC ATCCAGGACG AGGCACGCCG CAACCAAGCG GTGCTCGTCC TGGAAGCGAG CGCCGACGGA GCGCTGAAGA CCGCGCGCAA AGGCGCCGGC TGCCACCGCC TGCACGTCCA GGGCCGCGCC GCCCACGCCG GGCTCGAACC CGAACGCGGA GCCAACGCCG CCGTCGAGCT GGCGCATCAG ATCCTGGCGA TCGTCCAGCT CGCGGACCCG GCGCTGGGCA CGACCGTCAC GCCGTCGCTG ACCAGTGCCG GAGACTCGGC GAACACCGTG CCGCGCGCAG CGCGGGTCGC CGTCGACGTG CGGGCGTTCA GCGCCGAGGA GCAGCAGCGC GTCGCCGCCG GTCTGGAAGC GCTCCGACCG CGCCTGGAAG GCACTTCGCT GCGCGTGGAG CGCGGACACG AGAGCCCGCC TCTGCCGCCG GAAGCCTCCA GCGACCTGTT CGCTCGTGCC CAGCAGGCGG CAGCCCGGCT CGGCATGGAT CCGTTGCGCG GCATAGCCGT CGGCGGCGGT TCCGACGGCA ACTGGACGGC AGCCGTCGGC ACGCCCACCC TCGACGGTCT CGGCGCGGTC GGCGGCGGCG CGCACGCCGA GGACGAGCAC GTCCTGGCCG AGACGATGCC CGAACGCGCG GCGCTGCTGG CCGAACTCGT GGCCGACCTG CTGGGAGCCC GTTCGTGA
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Protein sequence | MNVMTLPSMI ADLETLVCCE SPTADRAATK RCAELFAEMG ARLLGSEPEW LEHGGAAQLR WRFGQGDRVL LLGHLDTVWP HGTLDRLPFA LADGKITGPG CFDMKVGLVQ MLHALAALQA SSPDAVDTLD GVTILVTTDE EVGSPAARAL IQDEARRNQA VLVLEASADG ALKTARKGAG CHRLHVQGRA AHAGLEPERG ANAAVELAHQ ILAIVQLADP ALGTTVTPSL TSAGDSANTV PRAARVAVDV RAFSAEEQQR VAAGLEALRP RLEGTSLRVE RGHESPPLPP EASSDLFARA QQAAARLGMD PLRGIAVGGG SDGNWTAAVG TPTLDGLGAV GGGAHAEDEH VLAETMPERA ALLAELVADL LGARS
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