| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4179 |
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| Symbol | |
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| ID | 8335533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4733471 |
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| End bp | 4735024 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644957282 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003114884 |
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| Protein GI | 256393320 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00909] amino acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.27139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAC AGAACGCGGC GAAAGGCCTA TTACGGACAA AAAGCATAGA AGACACCATC
CAAGAGACGA ACGACTCCGA GCGCAGCCTC AAACGTGAGC TGTCCGCGCT GGATCTGACC
GTCTACGGCA TCGGTGTCAT CATCGGCACC GGGATCTTCG TGCTGACCGG GACCGCTGCC
AAGCAGTACG CGGGACCCGC TGTCGCGCTG TCATTCGTCG CCGCGGGCAT CGTGTGCGCT
CTGGCGGCGC TGTGCTACGC CGAGTTCGCC TCGACGGTGC CCGTCGCCGG CTCGGCGTAC
ACCTTCTCCT ACGCCTCGCT TGGCGAGTTC CCCGCCTGGC TGATCGGCTG GGACCTGATC
CTGGAGCTCG CTCTGGGTGC TGCCGTGGTC GCAGTGGGTT GGTCCGGATA CATCCAGACG
CTGCTCAGTG ACATCGGGAT CCACTTCCCG ACCTCCATCG GCGGCGGCAC GGACAACCAC
TGGGGGCTCA ACCTCCCGGC CGCGCTGTTG GTGCTGGCCG TGACGGCGCT GCTGGTGGTC
GGCGTCAAGC AGTCGGCGCG GTTCACCACC GTGATCGTCG CGGTGAAGGT GGCCGTGGTG
CTGCTGGTCA TCGTCGCCGG GCTGTTCTTC ATCAAGGGTT CGAACTACCA CCCCTTCATT
CCGCCGACGA GCAAGGCGGC GAGCACCGAG ACCGGCGGCG CGCAGCCGCT CATCCAGCAC
CTGGGCTTCG CCCCCGGCGC GTTCGGCGTG ATGGGCATCT TCACCGCGGC CGCGGTCGTA
TTCTTCGCCT TCATCGGCTT CGACGTCGTG GCCACCGCCG CCGAGGAGGT CAAGAAGCCG
CAGCGGGACC TGCCGCGCGG CATCCTGGCC TCGCTCGCGG TGTGCACGGT GCTGTACGTC
AGCGTCACGC TGGTCGTCAC CGGTATGCAG AAGTACAGCC TGCTGTCGGA GAAGGCGCCG
CTGGCAGACG CCTTCAACGC CACCGGCGCG CACTGGCTCA GCGGCTTCAT CAGCGCCGGC
GCGGTCGCGG GTCTGACCTC GGTCACCTTG CTGCTGCTCA TGGGCCAGTC CCGAGTGTTC
TTCGCCATGA GCCGCGACGG CCTGCTCCCG CAGTCCTTCT CCCGCGTCCA CCCGAAGTTC
AAGACGCCCT ACCGGTCCAC GATCCTGCTG GGTCTGGTCG TCGCCTGCTT CGCCGCCGTC
ATCCCGCTCA AGGCGCTGGC CGAGCTGGTG AACATCGGCA CGCTGGCCGC CTTCATCCTG
GTCTCCCTCG GTGTCATCAT CCTGCGACGC ACCCGCCCGG ACCTGCCGCG TGCCTTCCGG
ACGCCGGCCG TGCCGTACGT GCCGATCGCG GCGATCCTGT CCTGCCTGTG GCTGATGCTC
AACCTGCCGG TGAACACCTG GATCCGGTTC GGGGCGTGGA TGGCGATCGG GCTGGTCGTC
TACTTCGGCT ACAGCCGGCG ACACGCGACG CACGCCGTGG AGCGAAGCAG CGTGGAGCGA
AACGCCATGG AACGAAACGC CACGGAGCGA AACGCCACGG CGCCGAGCGA CTGA
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| Protein sequence | MNTQNAAKGL LRTKSIEDTI QETNDSERSL KRELSALDLT VYGIGVIIGT GIFVLTGTAA
KQYAGPAVAL SFVAAGIVCA LAALCYAEFA STVPVAGSAY TFSYASLGEF PAWLIGWDLI
LELALGAAVV AVGWSGYIQT LLSDIGIHFP TSIGGGTDNH WGLNLPAALL VLAVTALLVV
GVKQSARFTT VIVAVKVAVV LLVIVAGLFF IKGSNYHPFI PPTSKAASTE TGGAQPLIQH
LGFAPGAFGV MGIFTAAAVV FFAFIGFDVV ATAAEEVKKP QRDLPRGILA SLAVCTVLYV
SVTLVVTGMQ KYSLLSEKAP LADAFNATGA HWLSGFISAG AVAGLTSVTL LLLMGQSRVF
FAMSRDGLLP QSFSRVHPKF KTPYRSTILL GLVVACFAAV IPLKALAELV NIGTLAAFIL
VSLGVIILRR TRPDLPRAFR TPAVPYVPIA AILSCLWLML NLPVNTWIRF GAWMAIGLVV
YFGYSRRHAT HAVERSSVER NAMERNATER NATAPSD
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