Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4168 |
Symbol | |
ID | 8335522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4719804 |
End bp | 4720391 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644957271 |
Product | hypothetical protein |
Protein accession | YP_003114873 |
Protein GI | 256393309 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0881208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0325962 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGAGCA TCTGCGTCTT CTCCGGCTCG TCGCACGGAC GCGGCGAGCG CTACCTCCAC CACGCCGAGC AGCTCGGCGC CGCCCTTGCC GCGCGCGGCA TCGCCGTCGT CTACGGCGGC GCCCGCGTCG GCACGATGGG TGCGCTCGCC GACGGCGCCC TGCGGGCCGG CGGACGCGTC GTGGGCGTCA TCCCGCGCTC GCTTTATGAG TGGGAGGTCG CGCACGAGGG CCTGACCGAG CTGCACATCG CCGAGGACCT GCACCAGCGC AAAGCCCTGA TGGCCGAGCG CGCCGACGCC TTCATCGCCC TGCCCGGCGG CTCGGGCACG CTGGAGGAGC TGTTCGAGAT CTGGACCTGG GGTCAGATCG GGCTGCACAC CAAACCGGTC GGTCTGCTCG ACGTCGCCGA CTACTTCACC CCGCTGGTCG CCTTCCTGGA CCACATGACC GGCGAGGGCT TCCTGCACCA GCCGCACCGC GACATGCTGA TCGTCGAGAC GGATCTCGAC GTGCTCCTGG AGCGCTTCGC CGCCTACCAG CCGCCGGAAT ACGTCTGGCG CGAGAACCCG ACCGAGCCGG GTGAATAA
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Protein sequence | MLSICVFSGS SHGRGERYLH HAEQLGAALA ARGIAVVYGG ARVGTMGALA DGALRAGGRV VGVIPRSLYE WEVAHEGLTE LHIAEDLHQR KALMAERADA FIALPGGSGT LEELFEIWTW GQIGLHTKPV GLLDVADYFT PLVAFLDHMT GEGFLHQPHR DMLIVETDLD VLLERFAAYQ PPEYVWRENP TEPGE
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