Gene Caci_4134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4134 
Symbol 
ID8335488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4673367 
End bp4674185 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content69% 
IMG OID644957237 
Product4-oxalocrotonate tautomerase 
Protein accessionYP_003114839 
Protein GI256393275 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.78864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTCG TCGACATCTC GCTCGTCCGC GGCACGTCGC CCGAGTACCG GCGCGCAGTC 
TCCCGCGCTG TCCACGACGC GCTGGTCACC GAGCTGACCA TGAAACCCGA CGACGACTTC
CAGCTCATCC ACGAACTCGA GCCGTCCGCG ATGGTCTTCC CCCGCGACTT CCGCGGCGGT
CCGCGCTCGC GGGACTGGAC CGTCATCCGC ATCACCGACG GCCTCGAGCG CGGACCGCAG
GCCAAGCGCC GCTTCTACAC GACGCTGGTC CGCCTGCTGG GCGCCGACCC CGGCATCGAC
CCGGCGGACG TCTTCGTGAT GATGACGCTC ACCCCGCCGG AGAACTTCTC CTTCGCCGAC
GGCGTCATCG GCACCGACGT CGTCGCGATC GAAGCGCTCG ACGCCGCGGC GCAGAACCCG
GGCTCCCGGG AGTCCTACAC GAAGGACGAG ATCGCCTACG CCATCACGCA GCTGTTCGCG
CACCGCGACA CCAGCCGCAT CCTGCCGATG CTCCGCGACG ACTACGTCAT GTCCCTGCCC
GAATCCCTGC CCTACGGCGG CGACTACACC GGCCGCGAAA CCTTCGAGGA CTTCTTCGCC
AAGACCCCCG GCGGCGCGGA CGTGTGGGAA TCGTTCAGCA GCCACGTCGA GCAGGTCATC
GAAGCCGACG GATACTTCGC GGTCCAGCTG ACCAACACCG CGGTCCCCAA GGCGACCGGC
GTCCCCGTCG TGCTCTACAA CCTGTGGCTG TTCGAGGTCA CCGGCGGCCG CATCGGCGGC
ATCCGGCTGT ACGCCGACAC GGCGCGCGTC CGCGGATAA
 
Protein sequence
MPFVDISLVR GTSPEYRRAV SRAVHDALVT ELTMKPDDDF QLIHELEPSA MVFPRDFRGG 
PRSRDWTVIR ITDGLERGPQ AKRRFYTTLV RLLGADPGID PADVFVMMTL TPPENFSFAD
GVIGTDVVAI EALDAAAQNP GSRESYTKDE IAYAITQLFA HRDTSRILPM LRDDYVMSLP
ESLPYGGDYT GRETFEDFFA KTPGGADVWE SFSSHVEQVI EADGYFAVQL TNTAVPKATG
VPVVLYNLWL FEVTGGRIGG IRLYADTARV RG