Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3957 |
Symbol | |
ID | 8335310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4493993 |
End bp | 4494277 |
Gene Length | 285 bp |
Protein Length | 94 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644957076 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003114679 |
Protein GI | 256393115 |
COG category | [K] Transcription |
COG ID | [COG3655] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.010777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.26793 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATCG TCGTCGACAT CGACGTGATG CTGGCCAAGC GGAAGATGTC GGTGGGCGAA CTCGCGGACC GTGTCGGGAT CACGCCCGCA AACCTGGCGG TGCTCAAGAA CGGCCGTGCC AAAGCAGTGC GCTTCACGAC GCTCGCCGCG CTCTGCGAGG CGCTCACCTG CCAGCCGGGC GACCTGCTCC GCTGGGAGGC CGATGACGCC AGGGGGGATG AACCGGGGTC GCTGACGCCA GCGAACAACA CAAGGGGCGC TGTGGATCAA GGTGTGATTG CCTGA
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Protein sequence | MPIVVDIDVM LAKRKMSVGE LADRVGITPA NLAVLKNGRA KAVRFTTLAA LCEALTCQPG DLLRWEADDA RGDEPGSLTP ANNTRGAVDQ GVIA
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