| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3821 |
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| Symbol | |
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| ID | 8335174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4321811 |
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| End bp | 4323472 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644956960 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003114563 |
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| Protein GI | 256392999 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.302994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0761262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCAGA TATCCCGGCG CGGCTTCCTG AGCGTGTCCG CCGGCGTGGC CGGTCTGTCC
CTCGCTGCCT GCGGGGGCGG CGGCGACGGC GGTTCGAAGC CGAGCAGCAA GCTGACCGCG
AACCGCACCG GCGCCATGGC GAAGTACGGC GTCGGGGACC AGTTCAAGGC CACGGTCCCG
CTGTCGTTCT CGGCCATGCT GCTGAGCAAC GCGAACTACC CCTACAAGGC CGACTGGGAA
TTCTGGTCGG AGCTGACCAA GCGCACCAAC GTGACGCTGC AGCCGACGGT GATCCCGGCC
AGCGACTACA ACCAGAAGCG AAGCGTCATG GTCAGCGCGG GCAACGCCCC GACGCTCATT
CCGAAGACGT ACCACCCGGA CGAGGAGGCG TACATCTCCG GCGGCGCGAT CCTGCCGGTC
AGCGACTACC TGGACCTGAT GCCGAACTTC CAGGACAAGG TCGCCAAGTG GAACCTGGCC
GGCGACCTGG ATCAGCTGCG CGAGGCCGAC GGCAAGTTCT ACCTGCTGCC CGGACTGCAC
CAGGACGTGT GGAAGGACTA CTCGCTGGCC ATCCGAACCG ACATCCTCAA GCAGCTGAAC
CTGCAAGTCC CGCAGACCTG GGACGACCTG ACCACAGTGC TGCGCACGAT GAAGCTGACC
TACCCGGACC GGTACCCGTT CTCCGACCGC TGGAGCACGG GGAGCACGAC GCCGCAGCCG
GGCGCCAACA ACCTGCTGGC CATCCTCGGC GAGGCCCACG GCGTCTGGGC CGGCTGGAGC
TACCAGCACG CGAACTGGAA CGCCGACGCG GGCAGGTTCG AGTACACCGG CGCCACGGAC
CAGTACAAGG CGATGATCCA GTATCTCAAC ACCCTGGTGA GCGAGAAGCT GCTGGACCCG
GAGAGCTTCA CCCAGAGCGA CGATCAGGCC CGGCAGAAGT TCGCCGACGG CCAGTCCTTC
GTGATCAGCG CCAACGCCCA GGAGCTGGTC AACCACTACC GCAAGGACAT CGCCAAGATC
TCCGGCGCCA CGGTGGCCAA GATCCCGGTG CCGATCGGCC CGATCGGCGC GGCCAAGACC
GGCTACCGCA CCGAGAACGG CATGATGATC TCCAACAAGG CCAAGGACGG CAAGGACTTC
GTCGCGCTGA TGCAGTTCAT CGACTGGCTC TGGTACTCCG ACGAGGGCCA GATGTTCGCC
AAGTGGGGCG TGCCGGGCAC CACCTACACC GGCAGCGTCG ACGACGGCAC GTTCAAGCTG
GCCCCGGACG TCACCTGGGC CGGGGTCAAC CCTTCGGGCA CCAAGAACCT CCAGGTCGAC
TACGGGTTCT TCAACGGAGT GTTCGCCTAC GGCGGCAGCA CCAAGCTGCT CGACTCTCAG
TTCCCCCCGG AGGAATTGGA GTTCCAGAAG GTGATGGACG CGCGCAAGAC GCTGCCATTG
GCCCCGCCCG CACCGCTGAG CTCCGACGAC CGTGAGCAGG CGACGCTGTG GACGACGTCG
CTGAAGGACT ACGTCGACCA GGAGACGCTC AAGTTCATCC TCGGCAAGCG TCCACTCTCG
GAGTGGACGG CCTACGTCTC CGAGCTCAAG GGCAAGAACA GCGACCAGTA CATCAAGCTC
GTGAACCAGG CCTACCAGGA CTTCAAGAAG AACCACGGCT GA
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| Protein sequence | MNQISRRGFL SVSAGVAGLS LAACGGGGDG GSKPSSKLTA NRTGAMAKYG VGDQFKATVP
LSFSAMLLSN ANYPYKADWE FWSELTKRTN VTLQPTVIPA SDYNQKRSVM VSAGNAPTLI
PKTYHPDEEA YISGGAILPV SDYLDLMPNF QDKVAKWNLA GDLDQLREAD GKFYLLPGLH
QDVWKDYSLA IRTDILKQLN LQVPQTWDDL TTVLRTMKLT YPDRYPFSDR WSTGSTTPQP
GANNLLAILG EAHGVWAGWS YQHANWNADA GRFEYTGATD QYKAMIQYLN TLVSEKLLDP
ESFTQSDDQA RQKFADGQSF VISANAQELV NHYRKDIAKI SGATVAKIPV PIGPIGAAKT
GYRTENGMMI SNKAKDGKDF VALMQFIDWL WYSDEGQMFA KWGVPGTTYT GSVDDGTFKL
APDVTWAGVN PSGTKNLQVD YGFFNGVFAY GGSTKLLDSQ FPPEELEFQK VMDARKTLPL
APPAPLSSDD REQATLWTTS LKDYVDQETL KFILGKRPLS EWTAYVSELK GKNSDQYIKL
VNQAYQDFKK NHG
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