| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3818 |
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| Symbol | |
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| ID | 8335171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4317502 |
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| End bp | 4319874 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644956957 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003114560 |
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| Protein GI | 256392996 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.224381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGTC AGATGTCCGC CGACACGGAT TCGGCGCCCG GCGTCCCTCC GTTATGGCGC
AATCCCCGAC TCACGCCGCA GGAACGCGCC GACGCCCTCA TCCCTGTGAT GACTCTCGAG
GAGAAGGTCG CGCAGTTGGC CGGGGTATGG GTCGGCGCCG ATGCTTCCGG CGGCGGCGTC
GCCCCGCATC AGCAGGACAT GGCCCCCCTC GCGTGGGAGG ACGTGATCCG GCACGGGCTG
GGACAGCTGA CCCGGCCGTT CGGGACGGCT CCGGTCGATC CGGTGGCCGG GGCCCGGTCG
CTGGCCGCCT CCCAGGCGCA GATCGCCGCT GCCAGCCGCT TCGGGATCCC GGCGCAGGTG
CACGAGGAAT GCCTGACCGG TTTCGCGACC TGGGGCGCGA CGGCCTACCC GGCGCCGCTG
GCCTGGGGCG CGTCCTTCGA CCCGGAACTC GTGGAGCAGA TGACCGGCCG GATCGGCCGC
TCGATGCGGG CGGTCGGTGT CCACCAGGGG CTGGCTCCGG TGCTGGACGT GACTCGCGAC
TACCGCTGGG GCCGCACCGA GGAGACCATC GGGGAGGATC CTCATCTGGT CGGCGTGATC
GGCGCGGCCT ATGTCAGAGG CCTGGAGAAC GCCGGGATCG TCGCGTCGCT CAAGCACTTC
GCCGGCTACT CCGCCTCCCG CGGCGGACGC AACCTCGGCC CGGTGCCCAT GGGACGCCGT
GAGCTGGCCG ACGTCGTCCT GCCGCCGTTC GAGGCGGCAC TGCGCCTGGG CGGCGCCCGC
TCGGTGATGA ACTCCTACTC CGAGATCGAC GGGGTGCCCG CCGCGGCCGA CGAACAACTG
CTGACCGGGC TGCTCCGCGA CCAATGGGGA TTCACCGGCA CGCTTGTCTC GGACTACTTC
GCGGTGCGCT TCCTTCAGTC ATTGCACGCG GTGGCCGGCG ACGCGGCACA CGCCGCGGAT
TTGGCCCTGC GGGCCGGCAT CGACGTGGAA CTTCCAACGG TGGACGTCTT CGGCACGCCG
CTCACCGAGG CGGTCCGCGC CGGCGCGGTC GAGGAGGCTC TGATCGACCG GGCTTTACGC
AGAGTCCTGA TCCAGAAGGC GGAACTCGGC CTGCTCGACC CGGACTGGCG GGCGCTGCCC
GAGGAGATCG AAGCCGGTCC GGTGAGCCTG GACAGCGAGG AGGACCGCGA GATCGCCCTG
CGCTTGGCCC GCCGGTCGGT AACGGTGCTG CGCAACGAGA ACGGAATCCT GCCGCTGATG
CCGGACCGGC GCGTCGCGCT GATCGGCCCG GTCGCCGACG ATCCGATGGC GATGCTGGGA
TGCTATTCCT TTCCCGCGCA CGTTAGCGGT AACACCGAAC ACGGCCTCGG TCTGGAAATC
CCCTCGCTCC GCGAGGCGCT CAGCGCGACG ATCGCCGACC TGCTCTACGA GCCCGGATGC
GCGATATCCG ATGACGACAC CTCCGGCATC GCCGCCGCGG CCGGCGTGGC GGCCGCGGCC
GACGTATGCG TCCTGGCCGT CGGCGACCGC GCCGGCCTGT TCGGCCGCGG CACCTCGGGC
GAGGGCTGCG ATGCGGCCGA CCTGAATCTG CCGGGGGTGC AGGCCGAACT GGTCCGCGCC
GTTCTCGCCA CAGGAACACC GGTGGTCCTG GTCCTGCTGG CCGGCCGGCC CTACGCGCTC
GGCGAAGACG TCGCAGACGC CGCCGGCATC GTCTACGCCT TCTTCGCCGG CCAGCTCGGC
GGACAGGCGA TCGCCGAGGT CCTGACCGGC GCGGTGAACC CCTGCGGCCG GCTTCCGGTC
AGCGTCCCGC GCGATTCCGG CGGTCTGCCG GTGACCTATC TCGCCCCGCC GCTGGGCCGC
CGCTCGCAGG TCTCCTCGGT GGATCCGACG CCGGCGTTCC CGTTCGGGCA CGGCCTGAGC
TACACGACGT TCGCCTGGAG CGGCGCCGCG GCCGACAGCG CCGAATGGCC GGTCGACGGC
GAGGCCACAG TCCGGATCAC CGTCAGCAAC AGCGGCGAGC GCGCGGGCAC CGAAGTCGTC
CAGCTGTATC TGCACGATCC GGTCGCGCAG ACCTCGCGAC CCGTCGTGCG ACTGGTCGGC
TTCGCGCGCG TCGATCTGGC GCCCGGCGAG AGCGCCGAGG TGGCCTTCGA AGTCCCGGCC
GACCTCGCCT CGTTCACCGG CCTGCGCGGC ACCCGCGTCG TGGAGCCCGG CGACGTCGAG
CTGCGGTTCG GCCGCTCCAG CGGCGAGGCG GCCGCGATCG TGCCGCTGCG CATGACCGGT
GCCGAACGCG AGGTGGGCCC GGGCCGCCGT CTGACCTCAC CTGTCCGCGT CGAGCGCTCG
CCGGCGCCCG CGCCGTCGAA GCCGGGGAGA TGA
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| Protein sequence | MTSQMSADTD SAPGVPPLWR NPRLTPQERA DALIPVMTLE EKVAQLAGVW VGADASGGGV
APHQQDMAPL AWEDVIRHGL GQLTRPFGTA PVDPVAGARS LAASQAQIAA ASRFGIPAQV
HEECLTGFAT WGATAYPAPL AWGASFDPEL VEQMTGRIGR SMRAVGVHQG LAPVLDVTRD
YRWGRTEETI GEDPHLVGVI GAAYVRGLEN AGIVASLKHF AGYSASRGGR NLGPVPMGRR
ELADVVLPPF EAALRLGGAR SVMNSYSEID GVPAAADEQL LTGLLRDQWG FTGTLVSDYF
AVRFLQSLHA VAGDAAHAAD LALRAGIDVE LPTVDVFGTP LTEAVRAGAV EEALIDRALR
RVLIQKAELG LLDPDWRALP EEIEAGPVSL DSEEDREIAL RLARRSVTVL RNENGILPLM
PDRRVALIGP VADDPMAMLG CYSFPAHVSG NTEHGLGLEI PSLREALSAT IADLLYEPGC
AISDDDTSGI AAAAGVAAAA DVCVLAVGDR AGLFGRGTSG EGCDAADLNL PGVQAELVRA
VLATGTPVVL VLLAGRPYAL GEDVADAAGI VYAFFAGQLG GQAIAEVLTG AVNPCGRLPV
SVPRDSGGLP VTYLAPPLGR RSQVSSVDPT PAFPFGHGLS YTTFAWSGAA ADSAEWPVDG
EATVRITVSN SGERAGTEVV QLYLHDPVAQ TSRPVVRLVG FARVDLAPGE SAEVAFEVPA
DLASFTGLRG TRVVEPGDVE LRFGRSSGEA AAIVPLRMTG AEREVGPGRR LTSPVRVERS
PAPAPSKPGR
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