| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3804 |
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| Symbol | |
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| ID | 8335157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4303239 |
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| End bp | 4304732 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644956943 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003114546 |
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| Protein GI | 256392982 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.404288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.817018 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATCGT CGTCCGAGCA CAACCCAGAT CGCAAAAGCC TGGCCGCCAA GCTCCGAATT
CTCGCGGCGG GCGCGCTCGC CGCCACGAGT CTGGTGGCGG CCGGGCAGAT CCCGGCGCAC
GCGGCCACCG CCGCGGCCGC TTCCACCTCC CAGTTCAAAG GCGTGAACTG GGCCGACCAG
CGCGACAACT TCGTCAACGG CGTCCTGTAC CCCTCCGGCC TCAACGCCTC CGACACCCAC
GCCTCCGCCT CGACGGTCGC GGCCCAGGTC GTGGGCCAGC TCGACACGAT CACCGGCGCG
AACACCGTCC GGATGCCGAT CAACGAGCCG ACCGTCTCGA CCTACTGGAG CACCTACACC
GGCGCGATCG ACGCGGCGCT CACCAAGGGC AAGGTGATCC TCGCCTACTG GGCCTACAGC
GGCGGGAAGC CCACCAGCAC GGCGGCGTTC AACCAGATGT GGGACACCGT CGTCGCCTCG
TACGGGAGCA ACCCGAACGT GTACTTCGAG GTCATCAACG AGCCTTACGG CTACAGCTCC
ACGGACTTGA ACAACTTCTA CAACACCTGG CTGACCAGGT ATCCCGCCGT CCCGCGCGGT
CAGGTCATCC TCGACGGTAC GGGCGACGCC ACGAACATCG CGGGAGTCGC CGGCGACAGC
CGGCTGGCGA ACACGCTGCT CGCAGTGCAC TACTACACGT TCTTTGCCGG AACATCCACG
AACGAGTCCG ACTGGGCGAA CGGCATCGCG AACGAGATCG GCAGCTATGC GAGCCGGACT
GTCGCCACCG AGTGGGGCGC GCCGATGAGT CCCGGCAGCA AGAACGGCGT CCACTACGAC
ACGATCAACT ATGACGTGCC GGGCGGGAAC TTCTTCGACG CCTACGTCCG GGGCGTCAGC
AGCGAGCTGC GCAAGCTCGG CGTCGGCAGC GTGTACTGGC CGGGGCTGCG TGACGGCGAC
TGGTACAGCC TGACCAGTAA GACCGGTACC GGTGCGTCGA TCGCGCTGAC GCTGGTGAAC
GCCTCCGGGC TGGACCGGCT GCAGTACGCG TGGGGAATCG GCAACGGCGG TGGCGGCGGC
GGGACGTACG ACCAGATCCG TGACGTGGCC ACCGGCCTGT GCGTCGACGG TCTGGGCAGT
ACCACAGTCG GTACCAATGC CAGCCAGTCC AGCTGCGTCA CAGGCGACAC CAACCAGGAG
TGGACCATCG TGAGCAGCGG GGGTTACGTC CGTATCCAGA ACCGCGCCAC CGGCCTGTTC
CTCGACGGCA TGGGCCGCAC GACCAACGGT TCAGCAGCCG GTCAGTACAG CAGCTCCACC
AGCAACAACC AGCAGTGGAC CGAGGTGAGC ACCGCCGGCA GCGCCCGCTT CCAGAACCGC
GCGACGGGCT TGTACCTCGA CGGCATGGGC CGCACCTCCA ACGGCTCCGA CCTCGGCCAA
TACGCCGGCA GTACCAGCAC CAACCAGCAG TGGACTCTGG TATCCGCGAG CTGA
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| Protein sequence | MRSSSEHNPD RKSLAAKLRI LAAGALAATS LVAAGQIPAH AATAAAASTS QFKGVNWADQ
RDNFVNGVLY PSGLNASDTH ASASTVAAQV VGQLDTITGA NTVRMPINEP TVSTYWSTYT
GAIDAALTKG KVILAYWAYS GGKPTSTAAF NQMWDTVVAS YGSNPNVYFE VINEPYGYSS
TDLNNFYNTW LTRYPAVPRG QVILDGTGDA TNIAGVAGDS RLANTLLAVH YYTFFAGTST
NESDWANGIA NEIGSYASRT VATEWGAPMS PGSKNGVHYD TINYDVPGGN FFDAYVRGVS
SELRKLGVGS VYWPGLRDGD WYSLTSKTGT GASIALTLVN ASGLDRLQYA WGIGNGGGGG
GTYDQIRDVA TGLCVDGLGS TTVGTNASQS SCVTGDTNQE WTIVSSGGYV RIQNRATGLF
LDGMGRTTNG SAAGQYSSST SNNQQWTEVS TAGSARFQNR ATGLYLDGMG RTSNGSDLGQ
YAGSTSTNQQ WTLVSAS
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