Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3798 |
Symbol | |
ID | 8335151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4296267 |
End bp | 4297316 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644956938 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_003114541 |
Protein GI | 256392977 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.189773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCCG AAGTCTCGGC CGAGATCCCC GCGGGGATCT CAGCTCCCGC GCCATCGGCG GCCGTCGAAC GGGACGCCGC CGCCGTATCC GGACCCGACC ACCCATCCAC CGACGAGCAG CTTCTGTCCG CCAAGCTCGT CCCGCTGCGC CGCCCCGGTC AGTGGATCTC GGCGGCCGTC CTGCTCGTGC TGCTGGCGAT GCTGGTCAAC ACTCTGCTGA CCAACCGGCG CTTCCAGTGG GACGTGGTCG GCCACTATCT CTTCCAGGCC TCGATCCTGC ACGGCCTGGA GCTCACGCTC TGGCTCACCG CCGCCGTGCT GGCCGCCGGC TACCTGATCG GGACCGGCGT CGCGGCGATG CGGCTGTCGC CGAACCCGAT CCTGAAGTCG CTGAGCTTCG GCTTCGTGTG GCTGATCCGC TCCCTGCCAC TGCTGGTACA GCTGCTCTTC TGGTATGAGA TCGCCTCCCT GTATCCGAGG CTGTCGTTCG GGATCCCGTT CGGGCCGGAG TTCGCCGGCG TCAAGACCGC GCACCTGTTC AACGGGGTCT TCGCCGCGTT CATCGCGCTG ACGCTCGACG TCGCGGCCTT CTCCTCGGAG CTCATCCGAG GAGGCATCCT GGCGGTGCCG TCCGGACAGG TCGAGGCCGC GCAGGCGCTC GGGCTGGGCA AGGGGCGGAT CTTCCGCAGG ATCGTGCTGC CGCAGGCGAT GCCGTCGATC ATCCCGGCGT CCGGGAACCT GCTGATCGGG ATGCTCAAGG CGACGTCGGT GATCAGCGTC ATCGCCGTAC AGGACCTGCT GTACTCCACG CAGCTCATCT ACAACGAGAA CTTCCAGGTC ATCCCGCTGC TGCTGGTCGC GACGCTGTGG TACATCGCGC TCACGACGGT CCTGTCCATC GGCCAGTACT TCGTCGAGCG GCACTACGCC CGCGGCACCG ACCGGCGCGG CGACACCGGG TTCCCCGGGT TCCGGCAGGC GTTCACCGCG AATCTCCCGC TGTTCGGCAG AGCCGGACGG CCGGCTCGCG CGAAGGCGGC AACGCCGTGA
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Protein sequence | MTSEVSAEIP AGISAPAPSA AVERDAAAVS GPDHPSTDEQ LLSAKLVPLR RPGQWISAAV LLVLLAMLVN TLLTNRRFQW DVVGHYLFQA SILHGLELTL WLTAAVLAAG YLIGTGVAAM RLSPNPILKS LSFGFVWLIR SLPLLVQLLF WYEIASLYPR LSFGIPFGPE FAGVKTAHLF NGVFAAFIAL TLDVAAFSSE LIRGGILAVP SGQVEAAQAL GLGKGRIFRR IVLPQAMPSI IPASGNLLIG MLKATSVISV IAVQDLLYST QLIYNENFQV IPLLLVATLW YIALTTVLSI GQYFVERHYA RGTDRRGDTG FPGFRQAFTA NLPLFGRAGR PARAKAATP
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