Gene Caci_3779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3779 
Symbol 
ID8335132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4270958 
End bp4272046 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content71% 
IMG OID644956919 
Productputative ABC-type sulfonate transport system 
Protein accessionYP_003114522 
Protein GI256392958 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCCGA GACACCTGGC CGACCGCGCC TCCGCGCTCC GCCGCACCGC CGCGCTCCTG 
ACCGCGATCG CGACCGTCGG CGGACTGACA GCCTGCGGCT CCTCCAGCCA TCCCGCGCTG
GCGCTGACAG CCGCTCTGCC CTCCACCGTG CCCTCCGGCA CGGTCCTGCG CATCGGCGAC
CCGGCGGTGC AGATCGCGAT CCAGGCCGCC GGCTTGGACA AAGAGCTCGC CGCCGACGGC
GTCACCGTCA AGTGGGCCAA CATCAGCGGC GGCCCGGACA GCATCAAGGC GTTCCGGGGC
AACCAGCTCG ACTGCAGCGC GGTCGCCGAC ATCCCCTCGC TGTTCGCGCA CTGGACCGGC
ACGTCGACGC AGATCGTCTT CCAGTCGGTG ACCGTCGACC CGCTCGCGCA CCCGGTCTAC
AAACTCGGCG TCGCGCCGGG CAAGGACGTC AAGACACTGG CGGACCTGAA GGGCAAGAAG
ATCGCCTACA GCCCCGGGCA GGCCCAGGGC GCGCTGGTCC TGCGGGTGCT GCAGAAGGCC
GGGCTCACCA AGAACGACGT CACGCTCGTG GACCTGCCCA GCACGGCGAG CACCTACAAC
CAGGCGCTGG GCAGCCACGC GGTGGACGTC GCGCCCCTGG GCACCAGCAC GATCGTGACG
TACCTGAAGC AGTACCCGGG TTCCTCGGCG ATCACCACCG GCATCCGGGA CGACGCCTCG
ACGCTGTACT GCCTCACCTC GTCGGTCAAG GACACGGCCA AGGCCGCCGC CCTGCAGGAG
TACGTAGCCG TCCGTACCAA GGCGCTGCTG TGGGAGAACG CCCACCCGGA CCAGTGGGCA
AAGCTCTACT ACGAGCAGAA CCAGGGCCTG AGCGCCGCCG ACGCGCAGCA CGCGGTCCAA
GTGAAGGGTC TGGCCGGCAT CCCGGCGACG TGGACGGACG CCGACGCCCG GCTCCAGGCG
ACCGCCGACC TTCTCGCCGC CGATCAGGGC AACGCGAAGT TCGACGTCTC CACGATCGTC
GACACCCGCT TCGCCGGCGT GGAGGCCGCG GCGGCGGGCT CGAACGTGGT CACGGGAGGC
GCGTCATGA
 
Protein sequence
MRPRHLADRA SALRRTAALL TAIATVGGLT ACGSSSHPAL ALTAALPSTV PSGTVLRIGD 
PAVQIAIQAA GLDKELAADG VTVKWANISG GPDSIKAFRG NQLDCSAVAD IPSLFAHWTG
TSTQIVFQSV TVDPLAHPVY KLGVAPGKDV KTLADLKGKK IAYSPGQAQG ALVLRVLQKA
GLTKNDVTLV DLPSTASTYN QALGSHAVDV APLGTSTIVT YLKQYPGSSA ITTGIRDDAS
TLYCLTSSVK DTAKAAALQE YVAVRTKALL WENAHPDQWA KLYYEQNQGL SAADAQHAVQ
VKGLAGIPAT WTDADARLQA TADLLAADQG NAKFDVSTIV DTRFAGVEAA AAGSNVVTGG
AS