Gene Caci_3768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3768 
Symbol 
ID8335121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4257038 
End bp4257493 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content72% 
IMG OID644956908 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_003114511 
Protein GI256392947 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACATCT CAGCCAAAGC GGACTACGCG GTGCGGGTCA TGCTCGAACT CGCCGCCCAC 
GGGCCGGGGG TGGTGAAGGC CTCGGTGGTG ATCGACCACC AGGACCTTCC CCGCAAGTTC
ATCGAGGCGA TCCTCGTCGA GCTCCGGCGG GCCGATCTGG TGCGCAGCCA CCGCGGCGCG
GACGGCGGCT ACACGCTGGC CCGGCCGGCC GCCGCGATCT CGATCGGTTC GGTCGTCCGA
GCCGTCGACG GACCGCTGGC CGAGGTTCGG GGTCTGCGTC CGCACGAGAC CGAGTACGCC
GGGGCCGCCG AGCACTTGGC CGACTGCTGG GTCGCCGCCC GCGCCGCGCT GCGCAAGGTT
TTGGACGAGA CCAGCCTCGC GCAGGTGCTC GACGGCAGGC TTCCGGCCCA CGTGCGGCGG
TTGGCCGAGT CGCCGGAGGC GTGGCTTCCG CGATAG
 
Protein sequence
MHISAKADYA VRVMLELAAH GPGVVKASVV IDHQDLPRKF IEAILVELRR ADLVRSHRGA 
DGGYTLARPA AAISIGSVVR AVDGPLAEVR GLRPHETEYA GAAEHLADCW VAARAALRKV
LDETSLAQVL DGRLPAHVRR LAESPEAWLP R