Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3736 |
Symbol | |
ID | 8335089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4214606 |
End bp | 4215238 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644956876 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003114479 |
Protein GI | 256392915 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGACC GTCTGTCCCA CTCCGCACAC TCCGCCCACT CCCCCGACTC CGCCCATGCG CTGCGCTCCG ACGCCTCGGA CAACCGCGAC CGCATCCTCG AAGCCGCCCG CGAGGTGTTC GCCGACGAAG GCCTGGACGT CCCGATGCGC GAGATCGCCC GCCGCGCCGA CGTCGGTCCC GCCACCCTCT ACCGCCACTT CGCGACCAAG GAGATCCTCG CCACCGAAGC CTTCGCCGAC CAGATGCGCG CCTGCCGCGC CATCGTCGAC CAAGGCCTCG CCGAGCCGGA CCCCTGGGAC GGCTTCCGCC ACGCCTTCGA GAACCTCTGC GAGGTGCACG CCCAGAACCG CGGCTTCGCA GCAAGGTTCA CCTCGACCTA CCCGCGAGCA ATCGATCTCG CCGCCGAAAC CGAATACGCC ATCTCAGCAA TGGCAGAACT CGCCGAACGC GCCAAAGCCG CCGGACGCCT GCGCCCCGAC TTCGTCATCG ACGACGTCAT CCTCATGCTC ATGGCCCACA ACGGCATCCA CGCGAACTCC CCCGCCGCGA ACGCCAAGGC CTCCCGCCGC TTCGCCATGT TCGCGATCCA GGCTTTCCAG GCGACAGAGG TAGCCGAAGC AAGTAACGCT TGA
|
Protein sequence | MTDRLSHSAH SAHSPDSAHA LRSDASDNRD RILEAAREVF ADEGLDVPMR EIARRADVGP ATLYRHFATK EILATEAFAD QMRACRAIVD QGLAEPDPWD GFRHAFENLC EVHAQNRGFA ARFTSTYPRA IDLAAETEYA ISAMAELAER AKAAGRLRPD FVIDDVILML MAHNGIHANS PAANAKASRR FAMFAIQAFQ ATEVAEASNA
|
| |