Gene Caci_3736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3736 
Symbol 
ID8335089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4214606 
End bp4215238 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content68% 
IMG OID644956876 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003114479 
Protein GI256392915 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC GTCTGTCCCA CTCCGCACAC TCCGCCCACT CCCCCGACTC CGCCCATGCG 
CTGCGCTCCG ACGCCTCGGA CAACCGCGAC CGCATCCTCG AAGCCGCCCG CGAGGTGTTC
GCCGACGAAG GCCTGGACGT CCCGATGCGC GAGATCGCCC GCCGCGCCGA CGTCGGTCCC
GCCACCCTCT ACCGCCACTT CGCGACCAAG GAGATCCTCG CCACCGAAGC CTTCGCCGAC
CAGATGCGCG CCTGCCGCGC CATCGTCGAC CAAGGCCTCG CCGAGCCGGA CCCCTGGGAC
GGCTTCCGCC ACGCCTTCGA GAACCTCTGC GAGGTGCACG CCCAGAACCG CGGCTTCGCA
GCAAGGTTCA CCTCGACCTA CCCGCGAGCA ATCGATCTCG CCGCCGAAAC CGAATACGCC
ATCTCAGCAA TGGCAGAACT CGCCGAACGC GCCAAAGCCG CCGGACGCCT GCGCCCCGAC
TTCGTCATCG ACGACGTCAT CCTCATGCTC ATGGCCCACA ACGGCATCCA CGCGAACTCC
CCCGCCGCGA ACGCCAAGGC CTCCCGCCGC TTCGCCATGT TCGCGATCCA GGCTTTCCAG
GCGACAGAGG TAGCCGAAGC AAGTAACGCT TGA
 
Protein sequence
MTDRLSHSAH SAHSPDSAHA LRSDASDNRD RILEAAREVF ADEGLDVPMR EIARRADVGP 
ATLYRHFATK EILATEAFAD QMRACRAIVD QGLAEPDPWD GFRHAFENLC EVHAQNRGFA
ARFTSTYPRA IDLAAETEYA ISAMAELAER AKAAGRLRPD FVIDDVILML MAHNGIHANS
PAANAKASRR FAMFAIQAFQ ATEVAEASNA